G432629


Basic Information

Item Value
gene id G432629
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4307346 ~ 4307693 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU496776
ATTTTAAAGTGCATTTGAATCGGCATCTCCAAAATGACGGATAATGAAAGACAGTTGACCGCCGTCGGTGTGTGGTACGATGACGATTCATATTCTTTAAAGGCGTATAGTTGGTATACAGTAGGTGGTGGAGGGAATGTCAAATATTATGGAAGATTATAGAGTCTTTTGGACACATTTGTTTATTTGCCTTGCGCTCAAAGCACTCTTGCACTTCAGAGTTAAGGAGGGTGCTCGGCCTTTGTGGCTTCTGACAATGAGGGTTGTCACAGAAGTGGGATCAAGTGAGCTTTTGCTAAAGTTCGGCTGAAAACGGCCCGTCTTACTTGCCGAGGCATGGAGTGGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU496776 True 348 lncRNA 0.45 1 4307346 4307693

Neighbor

gene id symbol gene type direction distance location
CI01000306_04253810_04255748 BARX1 coding upstream 50505 4253163 ~ 4256841 (+)
CI01000306_04111278_04162816 FBLN2 coding upstream 143502 4110793 ~ 4163844 (+)
CI01000306_04077126_04078242 NA coding upstream 228815 4077126 ~ 4078531 (+)
CI01000306_04050451_04054257 NA coding upstream 252944 4050332 ~ 4054402 (+)
CI01000306_03889176_03889334 NA coding upstream 417975 3888348 ~ 3889371 (+)
CI01000306_04454619_04454783 NA coding downstream 146926 4454619 ~ 4455552 (+)
CI01000306_04489350_04503649 ALPL coding downstream 181657 4489350 ~ 4505749 (+)
CI01000306_04570147_04574537 NMUR3 coding downstream 262090 4569783 ~ 4574728 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding downstream 378428 4686121 ~ 4753101 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding downstream 480477 4788170 ~ 4794154 (+)
G432628 NA non-coding upstream 6 4307121 ~ 4307340 (+)
G432627 NA non-coding upstream 476 4306649 ~ 4306870 (+)
G432622 NA non-coding upstream 6857 4300046 ~ 4300489 (+)
G432593 NA non-coding upstream 74283 4232281 ~ 4233063 (+)
G432592 NA non-coding upstream 75184 4231924 ~ 4232162 (+)
G432571 NA non-coding downstream 37336 4345029 ~ 4347871 (+)
G432568 NA non-coding downstream 52888 4360581 ~ 4362231 (+)
G432586 NA non-coding downstream 110499 4418192 ~ 4419629 (+)
G432556 NA non-coding downstream 148442 4456135 ~ 4506862 (+)
G432672 NA non-coding downstream 201746 4509439 ~ 4509709 (+)
CI01000306_03807268_03810946 NA other upstream 498348 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 524327 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 529796 3772689 ~ 3777550 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 1328189 2973156 ~ 2979157 (+)
G430719 NA other upstream 2156392 2148382 ~ 2150954 (+)
G432583 NA other downstream 18709 4326402 ~ 4327822 (+)
G432678 NA other downstream 214489 4522182 ~ 4522536 (+)
G432958 NA other downstream 1351235 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1672820 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1798450 6106143 ~ 6108175 (+)

Expression


Co-expression Network