G432556


Basic Information

Item Value
gene id G432556
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4456135 ~ 4506862 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU496688
AAAGAAAGAGTTTTCAGTAACACTTTACAATAAGGTCTTGTTTTCTTAACATCAGTTAGCTAACATGAAGTAACAATGAGCAATATTACAGCATTTTTAAAATCTTTAATAATGTTAGTTATTAAAATTGTTTATGTCAGTTAACAGTGCCTAACTAATGTTTTTAATTTTTTTTTTTTTTTTAAGAGGAATCCCTCATGTGCAAAACAATAATGTACATTAAAATGACTGGAAATGCTACTAATTACTGTACATCTTCAACAGTGTAATTAGATTACTGTACTAATTACTCTCTCTAAAAAGTATCGGATTACTTATTACTAATTAAATCTTATTTCAACTTTAACCAGTTGAACAATCCAAGGATAGACATGAAACTACAGTTTTAATTCTTTCAAATAAGCATATACAACTGCATAATTTATTCTTGAACTGACCAAAGTGTGTAAAGGGAGAAGGTGACATTAAAAACATTAGATGTTGAATTTTGATGTTAAATCCACTATTGTTTTATATAGAATTGTTGTATAGTCTATACAGTAATGCAATTTCATCAGAAGTAACTGTAATTAAATAAAGAGTAATCCCTTACTTTACTTTTTCAAGGGAAAAGTAATTAGATTACTTAGTAATCAACACTGATCATTATGTTGATTGATCTGAAACAGAACTGTATCTGTAAACTGTTTGATCATCAGACCAATTGTGGTGTATGTTTTTGAAGTACTGTTTATCTTTTATGTTTTCACATTTTATTGAGTGCAGAATCTGATTGGTGGTGCAATTGTTTGTTTATTTGTTTGTTTATAGTCTCTCTATGAATGTAGGAAGTACATAAATAATGACAAACATAAAGTAAATGACAGAGAGGTTATTTTCCTTGGCTATTCACTTGAACCCAAATTCAAATATGCTGTCAGAGCAGACATTGCAAAAGTCACTAAAATATACGAAGTTCTGGAAATGCAAGAAAGATTTCACAATAAAGGAAAAATGTGTGGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU496688 True 1005 lncRNA 0.29 2 4456135 4506862

Neighbor

gene id symbol gene type direction distance location
CI01000306_04454619_04454783 NA coding upstream 583 4454619 ~ 4455552 (+)
CI01000306_04253810_04255748 BARX1 coding upstream 199294 4253163 ~ 4256841 (+)
CI01000306_04111278_04162816 FBLN2 coding upstream 292291 4110793 ~ 4163844 (+)
CI01000306_04077126_04078242 NA coding upstream 377604 4077126 ~ 4078531 (+)
CI01000306_04050451_04054257 NA coding upstream 401733 4050332 ~ 4054402 (+)
CI01000306_04570147_04574537 NMUR3 coding downstream 62921 4569783 ~ 4574728 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding downstream 179259 4686121 ~ 4753101 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding downstream 281308 4788170 ~ 4794154 (+)
CI01000306_04859604_04861501 NA coding downstream 352676 4859538 ~ 4861570 (+)
CI01000306_04863197_04868703 NA coding downstream 356335 4863197 ~ 4868794 (+)
G432586 NA non-coding upstream 36506 4418192 ~ 4419629 (+)
G432568 NA non-coding upstream 93904 4360581 ~ 4362231 (+)
G432571 NA non-coding upstream 108264 4345029 ~ 4347871 (+)
G432629 NA non-coding upstream 148442 4307346 ~ 4307693 (+)
G432628 NA non-coding upstream 148795 4307121 ~ 4307340 (+)
G432672 NA non-coding downstream 2577 4509439 ~ 4509709 (+)
G432680 NA non-coding downstream 23455 4530317 ~ 4530526 (+)
G432697 NA non-coding downstream 60748 4567610 ~ 4567836 (+)
G432703 NA non-coding downstream 73735 4580597 ~ 4586360 (+)
G432745 NA non-coding downstream 315288 4822150 ~ 4822382 (+)
G432583 NA other upstream 128313 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 647137 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 673116 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 678585 3772689 ~ 3777550 (+)
CI01000306_02974291_02976718 TP53INP2 other upstream 1476978 2973156 ~ 2979157 (+)
G432678 NA other downstream 15320 4522182 ~ 4522536 (+)
G432958 NA other downstream 1152066 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1473651 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1599281 6106143 ~ 6108175 (+)
G433724 NA other downstream 1601749 6108611 ~ 6129778 (+)

Expression


Co-expression Network