Gene
RNA
| Item | Value |
|---|---|
| gene id | G432672 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 4509439 ~ 4509709 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU496825 | True | 271 | lncRNA | 0.29 | 1 | 4509439 | 4509709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_04489350_04503649 | ALPL | coding | upstream | 3690 | 4489350 ~ 4505749 (+) |
| CI01000306_04454619_04454783 | NA | coding | upstream | 53887 | 4454619 ~ 4455552 (+) |
| CI01000306_04253810_04255748 | BARX1 | coding | upstream | 252598 | 4253163 ~ 4256841 (+) |
| CI01000306_04111278_04162816 | FBLN2 | coding | upstream | 345595 | 4110793 ~ 4163844 (+) |
| CI01000306_04077126_04078242 | NA | coding | upstream | 430908 | 4077126 ~ 4078531 (+) |
| CI01000306_04570147_04574537 | NMUR3 | coding | downstream | 60074 | 4569783 ~ 4574728 (+) |
| CI01000306_04686121_04753101 | EPHB2, EPHB2B | coding | downstream | 176412 | 4686121 ~ 4753101 (+) |
| CI01000306_04789240_04793134 | LRRC38, LRRC38A | coding | downstream | 278461 | 4788170 ~ 4794154 (+) |
| CI01000306_04859604_04861501 | NA | coding | downstream | 349829 | 4859538 ~ 4861570 (+) |
| CI01000306_04863197_04868703 | NA | coding | downstream | 353488 | 4863197 ~ 4868794 (+) |
| G432556 | NA | non-coding | upstream | 2577 | 4456135 ~ 4506862 (+) |
| G432586 | NA | non-coding | upstream | 89810 | 4418192 ~ 4419629 (+) |
| G432568 | NA | non-coding | upstream | 147208 | 4360581 ~ 4362231 (+) |
| G432571 | NA | non-coding | upstream | 161568 | 4345029 ~ 4347871 (+) |
| G432629 | NA | non-coding | upstream | 201746 | 4307346 ~ 4307693 (+) |
| G432680 | NA | non-coding | downstream | 20608 | 4530317 ~ 4530526 (+) |
| G432697 | NA | non-coding | downstream | 57901 | 4567610 ~ 4567836 (+) |
| G432703 | NA | non-coding | downstream | 70888 | 4580597 ~ 4586360 (+) |
| G432745 | NA | non-coding | downstream | 312441 | 4822150 ~ 4822382 (+) |
| G432768 | NA | non-coding | downstream | 352619 | 4862328 ~ 4862623 (+) |
| G432583 | NA | other | upstream | 181617 | 4326402 ~ 4327822 (+) |
| CI01000306_03807268_03810946 | NA | other | upstream | 700441 | 3807268 ~ 3811243 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | upstream | 726420 | 3778052 ~ 3783019 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | upstream | 731889 | 3772689 ~ 3777550 (+) |
| CI01000306_02974291_02976718 | TP53INP2 | other | upstream | 1530282 | 2973156 ~ 2979157 (+) |
| G432678 | NA | other | downstream | 12473 | 4522182 ~ 4522536 (+) |
| G432958 | NA | other | downstream | 1149219 | 5658928 ~ 5660169 (+) |
| CI01000306_05976516_05985251 | TMEM178A, TMEM178 | other | downstream | 1470804 | 5975822 ~ 5986288 (+) |
| CI01000306_06106248_06107449 | GM2573, CS056, WDR83OS | other | downstream | 1596434 | 6106143 ~ 6108175 (+) |
| G433724 | NA | other | downstream | 1598902 | 6108611 ~ 6129778 (+) |
