G432680


Basic Information

Item Value
gene id G432680
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 4530317 ~ 4530526 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU496838
CAAAATTCCTCCACTACACCATTAGCATGCATATGAAATATTACATTTTTATACAAAGAAAAAAAACCCCCCACAATGATCAAAATTAAATATGAGATGTTTCTGGATATTGATCTAGGTGTTAGGGGCAGAATTCTAGCATCTGCTGCTGGTTAGAGAAAAATCTGTAGGAAAAACAGTTTTAGAAAAAAAAGTGTAATTACCATATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU496838 True 210 lncRNA 0.32 1 4530317 4530526

Neighbor

gene id symbol gene type direction distance location
CI01000306_04489350_04503649 ALPL coding upstream 24568 4489350 ~ 4505749 (+)
CI01000306_04454619_04454783 NA coding upstream 74765 4454619 ~ 4455552 (+)
CI01000306_04253810_04255748 BARX1 coding upstream 273476 4253163 ~ 4256841 (+)
CI01000306_04111278_04162816 FBLN2 coding upstream 366473 4110793 ~ 4163844 (+)
CI01000306_04077126_04078242 NA coding upstream 451786 4077126 ~ 4078531 (+)
CI01000306_04570147_04574537 NMUR3 coding downstream 39257 4569783 ~ 4574728 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding downstream 155595 4686121 ~ 4753101 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding downstream 257644 4788170 ~ 4794154 (+)
CI01000306_04859604_04861501 NA coding downstream 329012 4859538 ~ 4861570 (+)
CI01000306_04863197_04868703 NA coding downstream 332671 4863197 ~ 4868794 (+)
G432672 NA non-coding upstream 20608 4509439 ~ 4509709 (+)
G432556 NA non-coding upstream 23455 4456135 ~ 4506862 (+)
G432586 NA non-coding upstream 110688 4418192 ~ 4419629 (+)
G432568 NA non-coding upstream 168086 4360581 ~ 4362231 (+)
G432571 NA non-coding upstream 182446 4345029 ~ 4347871 (+)
G432697 NA non-coding downstream 37084 4567610 ~ 4567836 (+)
G432703 NA non-coding downstream 50071 4580597 ~ 4586360 (+)
G432745 NA non-coding downstream 291624 4822150 ~ 4822382 (+)
G432768 NA non-coding downstream 331802 4862328 ~ 4862623 (+)
G432795 NA non-coding downstream 414006 4944532 ~ 4944764 (+)
G432678 NA other upstream 7781 4522182 ~ 4522536 (+)
G432583 NA other upstream 202495 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 721319 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 747298 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 752767 3772689 ~ 3777550 (+)
G432958 NA other downstream 1128402 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 1449987 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 1575617 6106143 ~ 6108175 (+)
G433724 NA other downstream 1578085 6108611 ~ 6129778 (+)
G434545 NA other downstream 2588791 7119317 ~ 7119859 (+)

Expression


Co-expression Network