G432907


Basic Information

Item Value
gene id G432907
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5212791 ~ 5213089 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497080
CACAAAGCCATTTATTTACAGCCCTCTACTTGTGCTAGTGTAAATATTCTTCATGAGAGTAGACGCTGTCACCGAAGCACCGCAGTTCATCAAAAACAACCCTTTCTTGTCAAGGACTAATGTGGCGGCGTATATCACAGCTATGAAAACTGGGCTCGCCAAGGGACCAGATGTCCTCTTCAAAGCCTTCTTCAAGTCATTTAAGTTTTTAAGGAGAGAAAAATATGGAAACAGATAATGGAATTGAAATCATTTCTGTTGATTTTACTTCTTAACTAAAGCTGAAACTTGGAGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497080 True 299 lncRNA 0.39 1 5212791 5213089

Neighbor

gene id symbol gene type direction distance location
CI01000306_04958429_04977273 NA coding upstream 235373 4958341 ~ 4977418 (+)
CI01000306_04863197_04868703 NA coding upstream 343997 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 351221 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 418637 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 459690 4686121 ~ 4753101 (+)
CI01000306_05358831_05362667 NA coding downstream 145742 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 154825 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 176484 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 186225 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 243071 5456160 ~ 5473514 (+)
G432795 NA non-coding upstream 268027 4944532 ~ 4944764 (+)
G432768 NA non-coding upstream 350168 4862328 ~ 4862623 (+)
G432745 NA non-coding upstream 390409 4822150 ~ 4822382 (+)
G432703 NA non-coding upstream 626431 4580597 ~ 4586360 (+)
G432697 NA non-coding upstream 644955 4567610 ~ 4567836 (+)
G432912 NA non-coding downstream 9729 5222818 ~ 5223318 (+)
G432918 NA non-coding downstream 26158 5239247 ~ 5239471 (+)
G432925 NA non-coding downstream 33236 5246325 ~ 5246557 (+)
G432902 NA non-coding downstream 35131 5248220 ~ 5249076 (+)
G432903 NA non-coding downstream 36163 5249252 ~ 5251194 (+)
G432678 NA other upstream 690255 4522182 ~ 4522536 (+)
G432583 NA other upstream 884969 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1403793 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1429772 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1435241 3772689 ~ 3777550 (+)
G432958 NA other downstream 445839 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 767424 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 893054 6106143 ~ 6108175 (+)
G433724 NA other downstream 895522 6108611 ~ 6129778 (+)
G434545 NA other downstream 1906228 7119317 ~ 7119859 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004188 NA non-coding NC_007122.7 CM002895.2 29099927 ~ 29319919 (-)