G432905


Basic Information

Item Value
gene id G432905
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5262435 ~ 5263344 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497078
ACTTTCAGCTTCTACATCAATAGCAATCCAGCGGCCTCAATCGTTTCGGGTCATGGGAACAAGGTAGCACACTGTAGTGTGGAATTATTACCTAAAATAACCAGTGACGAGAGAGACAAATTCTCACAGGCTCTGTTGCTTATCCCACCGACACACATCATTGTACGGCACTTTGCCATGAGTCCCAAAGAGGCAGATTTACAGAGGAGATGCTTCCCCCTCCAGCTGCTGGGCCAGCATGGCTCCGTGGGGAAAGGGATACAATGTAATCAGTCGAACAAAACAGAGCACTGGCCTGAACCGTGGAGGATCAACCAAAAAGCAGCAGGGGCCCACTCACCTACCACTAGCTCAAATCTCCTCTCTGATGGGCGCATCCAGAGAAATCTCAGAGGATAAAAGAGATGTTTGATTCCAAAGATAAAACCCAAGAAGGCAGAACTAAAGGAAGGCTCAGGGTTATGGAGGCCCATGGGGTAGATCCCTGGGGTATGTCGCCTCCATATTTGAGACAGCTGGGGAAGATTATGAGCACGTCAGAGCTATTTACTCATCCTGTGTGCTTTAAAGGTAAGAGGGAAAAAAGGAGAGCGAACAACAGACCCCAGAGGATTATTGATCTTTACACACAAGCTAATTTGTCAGTCAGTGTTGGCCAAGTGCCTGTGAAACATAGTCTGTGCTCTTCCATTTGCTACAGTTTGGTGTGAAAACATATCAGCAGCATGGCATGAGTACAGCTTTGAAATGAGTCTACCTGAGTGGACAGACTGGAGCCATCAACTACAGTTACTGTGTTAGCACAGCTAGCCCAGACCGAGTCCTCCAAGGCAAGTAGCGTCCTGATGGGATCTGAACCAACTGTTACTTTTCTACAGGAGTCTTGGCTCCACAGTTCCCCTACAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497078 True 910 lncRNA 0.48 1 5262435 5263344

Neighbor

gene id symbol gene type direction distance location
CI01000306_04958429_04977273 NA coding upstream 285017 4958341 ~ 4977418 (+)
CI01000306_04863197_04868703 NA coding upstream 393641 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 400865 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 468281 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 509334 4686121 ~ 4753101 (+)
CI01000306_05358831_05362667 NA coding downstream 95487 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 104570 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 126229 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 135970 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 192816 5456160 ~ 5473514 (+)
G432903 NA non-coding upstream 11241 5249252 ~ 5251194 (+)
G432902 NA non-coding upstream 13359 5248220 ~ 5249076 (+)
G432925 NA non-coding upstream 15878 5246325 ~ 5246557 (+)
G432918 NA non-coding upstream 22964 5239247 ~ 5239471 (+)
G432912 NA non-coding upstream 39117 5222818 ~ 5223318 (+)
G432927 NA non-coding downstream 1619 5264963 ~ 5265223 (+)
G432933 NA non-coding downstream 21450 5284794 ~ 5285109 (+)
G432934 NA non-coding downstream 21874 5285218 ~ 5285452 (+)
G432935 NA non-coding downstream 22956 5286300 ~ 5286572 (+)
G432936 NA non-coding downstream 25832 5289176 ~ 5289394 (+)
G432678 NA other upstream 739899 4522182 ~ 4522536 (+)
G432583 NA other upstream 934613 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1453437 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1479416 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1484885 3772689 ~ 3777550 (+)
G432958 NA other downstream 395584 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 717169 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 842799 6106143 ~ 6108175 (+)
G433724 NA other downstream 845267 6108611 ~ 6129778 (+)
G434545 NA other downstream 1855973 7119317 ~ 7119859 (+)

Expression


Co-expression Network