G432939


Basic Information

Item Value
gene id G432939
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5292909 ~ 5293130 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497112
CGGAGTGACATCACATCTCATATGTGTATCTAATTATAAAAACTGAAGCATTGCACTAGTTAAAATGTTTGAGGCTCCCGGTGTGCACTCTCTGAAGATATTTTCAGTATAGCAGACTAATGAGCCTTCATAAGTCTCATTCCTGCAGCAGGTGTCCGTCTCAGCATGTGAAGCAGCAACCTCCAGGTTTCAATTAATGTCTAAATTCTGGAGGCGTGGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497112 True 222 lncRNA 0.43 1 5292909 5293130

Neighbor

gene id symbol gene type direction distance location
CI01000306_04958429_04977273 NA coding upstream 315491 4958341 ~ 4977418 (+)
CI01000306_04863197_04868703 NA coding upstream 424115 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 431339 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 498755 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 539808 4686121 ~ 4753101 (+)
CI01000306_05358831_05362667 NA coding downstream 65701 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 74784 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 96443 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 106184 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 163030 5456160 ~ 5473514 (+)
G432938 NA non-coding upstream 1815 5290829 ~ 5291094 (+)
G432937 NA non-coding upstream 3178 5289504 ~ 5289731 (+)
G432936 NA non-coding upstream 3515 5289176 ~ 5289394 (+)
G432935 NA non-coding upstream 6337 5286300 ~ 5286572 (+)
G432934 NA non-coding upstream 7457 5285218 ~ 5285452 (+)
G432996 NA non-coding downstream 3876 5297006 ~ 5297307 (+)
G432998 NA non-coding downstream 8615 5301745 ~ 5302055 (+)
G433000 NA non-coding downstream 16600 5309730 ~ 5309958 (+)
G433001 NA non-coding downstream 17113 5310243 ~ 5310575 (+)
G433002 NA non-coding downstream 18029 5311159 ~ 5311411 (+)
G432678 NA other upstream 770373 4522182 ~ 4522536 (+)
G432583 NA other upstream 965087 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1483911 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1509890 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1515359 3772689 ~ 3777550 (+)
G432958 NA other downstream 365798 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 687383 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 813013 6106143 ~ 6108175 (+)
G433724 NA other downstream 815481 6108611 ~ 6129778 (+)
G434545 NA other downstream 1826187 7119317 ~ 7119859 (+)

Expression


Co-expression Network