G433001


Basic Information

Item Value
gene id G433001
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5310243 ~ 5310575 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497183
GATTTTGATTCACTAAAAAGGATCGGCTCATAAAAGCTATTTGGAATTCAGACTACATTGTATATTCTTGATTTACTAAAATCATTTGTTTCGCTGTATCAGTCTGAATCAGTCTATACTGTTTGCGCTACATGTTTCTGGAAATTCATAAAAGTGAATAATAACTGTATCTTGGTTCCCTATCCTAATGACATCAATGCATTATGACATCACAGCAGGCTGACGCAGGCATTGGAAAATTCAGGGAGTGTGACTGTTTTGGAAGCAGGGCAGGGGCTCTGGTGAACATCTGACTGAGCAGATTGCTCTTGTGGGTTCTGCAGAACGTGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497183 True 333 lncRNA 0.40 1 5310243 5310575

Neighbor

gene id symbol gene type direction distance location
CI01000306_04958429_04977273 NA coding upstream 332825 4958341 ~ 4977418 (+)
CI01000306_04863197_04868703 NA coding upstream 441449 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 448673 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 516089 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 557142 4686121 ~ 4753101 (+)
CI01000306_05358831_05362667 NA coding downstream 48256 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 57339 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 78998 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 88739 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 145585 5456160 ~ 5473514 (+)
G433000 NA non-coding upstream 285 5309730 ~ 5309958 (+)
G432998 NA non-coding upstream 8188 5301745 ~ 5302055 (+)
G432996 NA non-coding upstream 12936 5297006 ~ 5297307 (+)
G432939 NA non-coding upstream 17113 5292909 ~ 5293130 (+)
G432938 NA non-coding upstream 19149 5290829 ~ 5291094 (+)
G433002 NA non-coding downstream 584 5311159 ~ 5311411 (+)
G433007 NA non-coding downstream 11851 5322426 ~ 5330534 (+)
G433010 NA non-coding downstream 20291 5330866 ~ 5331414 (+)
G433011 NA non-coding downstream 20866 5331441 ~ 5332340 (+)
G433012 NA non-coding downstream 22531 5333106 ~ 5333457 (+)
G432678 NA other upstream 787707 4522182 ~ 4522536 (+)
G432583 NA other upstream 982421 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1501245 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1527224 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1532693 3772689 ~ 3777550 (+)
G432958 NA other downstream 348353 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 669938 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 795568 6106143 ~ 6108175 (+)
G433724 NA other downstream 798036 6108611 ~ 6129778 (+)
G434545 NA other downstream 1808742 7119317 ~ 7119859 (+)

Expression


Co-expression Network