G433010


Basic Information

Item Value
gene id G433010
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5330866 ~ 5331414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497192
AACTGCGTCTTTGTTCTCTTCACTTTAGCCCTGATGACTTTGAGTCTTTTTATCTGTATGTTTTGGTGCAACGGTAATCTAGTAACGCATACAGGTCTTAATATCCGCGGGGTTCCTTTTAAAACCCAATCAGCCTTTTCAATATGAGCCAGAGCTCAAAATTAGTGAGGATGAAAACATCGAAGACATGCAATGTCTCTGTGGCTATTCGAACTACTGTTGTATGATTGACGTGTAGAAATCGTCTTATCACCTGATGCATACACGCAGTTAAACATGCTGAGAAGATGCTACTGTTTATGCGATCACAGATATCTCGTGCATCACAGCGCACGCGAGCTTTGAGGCAGTCTGTCTCAATCCAGATGTGTTATAGGCTTACCTTCGTCAGTCTCCACGACAGGCGCGGCATTTGGTTAAAGCCTATGCTTATATCCATCGGCAACTGAAAGCTCTTTCAGCTGTGGTCTTCTAAAAGCCTCAAAGGCGCCAGGGCTTGTGAAGAGAATTAAAACACGGATCTTTAGGAAGTTTTATTTGTCCACATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497192 True 549 lncRNA 0.43 1 5330866 5331414

Neighbor

gene id symbol gene type direction distance location
CI01000306_04958429_04977273 NA coding upstream 353448 4958341 ~ 4977418 (+)
CI01000306_04863197_04868703 NA coding upstream 462072 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 469296 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 536712 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 577765 4686121 ~ 4753101 (+)
CI01000306_05358831_05362667 NA coding downstream 27417 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 36500 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 58159 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 67900 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 124746 5456160 ~ 5473514 (+)
G433007 NA non-coding upstream 332 5322426 ~ 5330534 (+)
G433002 NA non-coding upstream 19455 5311159 ~ 5311411 (+)
G433001 NA non-coding upstream 20291 5310243 ~ 5310575 (+)
G433000 NA non-coding upstream 20908 5309730 ~ 5309958 (+)
G432998 NA non-coding upstream 28811 5301745 ~ 5302055 (+)
G433011 NA non-coding downstream 27 5331441 ~ 5332340 (+)
G433012 NA non-coding downstream 1692 5333106 ~ 5333457 (+)
G433005 NA non-coding downstream 5607 5337021 ~ 5337344 (+)
G433006 NA non-coding downstream 8361 5339775 ~ 5345924 (+)
G433019 NA non-coding downstream 14614 5346028 ~ 5346433 (+)
G432678 NA other upstream 808330 4522182 ~ 4522536 (+)
G432583 NA other upstream 1003044 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1521868 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1547847 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1553316 3772689 ~ 3777550 (+)
G432958 NA other downstream 327514 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 649099 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 774729 6106143 ~ 6108175 (+)
G433724 NA other downstream 777197 6108611 ~ 6129778 (+)
G434545 NA other downstream 1787903 7119317 ~ 7119859 (+)

Expression


Co-expression Network