Gene
RNA
| Item | Value |
|---|---|
| gene id | G433020 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 5346445 ~ 5346666 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU497202 | True | 222 | lncRNA | 0.35 | 1 | 5346445 | 5346666 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_04958429_04977273 | NA | coding | upstream | 369027 | 4958341 ~ 4977418 (+) |
| CI01000306_04863197_04868703 | NA | coding | upstream | 477651 | 4863197 ~ 4868794 (+) |
| CI01000306_04859604_04861501 | NA | coding | upstream | 484875 | 4859538 ~ 4861570 (+) |
| CI01000306_04789240_04793134 | LRRC38, LRRC38A | coding | upstream | 552291 | 4788170 ~ 4794154 (+) |
| CI01000306_04686121_04753101 | EPHB2, EPHB2B | coding | upstream | 593344 | 4686121 ~ 4753101 (+) |
| CI01000306_05358831_05362667 | NA | coding | downstream | 12165 | 5358831 ~ 5362710 (+) |
| CI01000306_05368199_05371572 | NA | coding | downstream | 21248 | 5367914 ~ 5371880 (+) |
| CI01000306_05390270_05392867 | NA | coding | downstream | 42907 | 5389573 ~ 5393074 (+) |
| CI01000306_05399614_05410516 | NA | coding | downstream | 52648 | 5399314 ~ 5410886 (+) |
| CI01000306_05456160_05473514 | NA | coding | downstream | 109494 | 5456160 ~ 5473514 (+) |
| G433019 | NA | non-coding | upstream | 12 | 5346028 ~ 5346433 (+) |
| G433006 | NA | non-coding | upstream | 521 | 5339775 ~ 5345924 (+) |
| G433005 | NA | non-coding | upstream | 9101 | 5337021 ~ 5337344 (+) |
| G433012 | NA | non-coding | upstream | 12988 | 5333106 ~ 5333457 (+) |
| G433011 | NA | non-coding | upstream | 14105 | 5331441 ~ 5332340 (+) |
| G433021 | NA | non-coding | downstream | 327 | 5346993 ~ 5347741 (+) |
| G433022 | NA | non-coding | downstream | 1668 | 5348334 ~ 5348747 (+) |
| G433023 | NA | non-coding | downstream | 2217 | 5348883 ~ 5349286 (+) |
| G433024 | NA | non-coding | downstream | 2905 | 5349571 ~ 5349773 (+) |
| G433025 | NA | non-coding | downstream | 3191 | 5349857 ~ 5350870 (+) |
| G432678 | NA | other | upstream | 823909 | 4522182 ~ 4522536 (+) |
| G432583 | NA | other | upstream | 1018623 | 4326402 ~ 4327822 (+) |
| CI01000306_03807268_03810946 | NA | other | upstream | 1537447 | 3807268 ~ 3811243 (+) |
| CI01000306_03778075_03781910 | MAP1LC3A, MAP1LC3A.L | other | upstream | 1563426 | 3778052 ~ 3783019 (+) |
| CI01000306_03772689_03777211 | DYNLRB1 | other | upstream | 1568895 | 3772689 ~ 3777550 (+) |
| G432958 | NA | other | downstream | 312262 | 5658928 ~ 5660169 (+) |
| CI01000306_05976516_05985251 | TMEM178A, TMEM178 | other | downstream | 633847 | 5975822 ~ 5986288 (+) |
| CI01000306_06106248_06107449 | GM2573, CS056, WDR83OS | other | downstream | 759477 | 6106143 ~ 6108175 (+) |
| G433724 | NA | other | downstream | 761945 | 6108611 ~ 6129778 (+) |
| G434545 | NA | other | downstream | 1772651 | 7119317 ~ 7119859 (+) |
