G433022


Basic Information

Item Value
gene id G433022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5348334 ~ 5348747 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497204
GTTAAGAAAGCATCTGATCATAGCGATATGGATGTTTGCACAAGATCTGCAATTCGACACTCCCGTAAAGTCATGTCACATTTGTTTATATACCACTTTATACAATAGATTGTTAAAAAGCTGCTCTACAGTATTAAACATGAAAAAAAAACAGTATTAGTGTCTCTTTCAATTAGAATTACATCAATATTTTCTACTTTCTGCTTTTCTAGAAAGTTTGCTTTGGCAAGCTGTTTCGAACCCCCGATATGAACACAAAACAAACTTTTTGGCCTGATTTTGCTCGAATGACGTCACAGTGGTTCAGTCTTCGATTCCCCTTTAAGTACATTGAAGTACATCGGGGCTTTAAAGGGATAGTTTACCCAAAATTGAAAATTATGTTATTTACTCACCCTTAAGTTGTTCCAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497204 True 414 lncRNA 0.35 1 5348334 5348747

Neighbor

gene id symbol gene type direction distance location
CI01000306_04958429_04977273 NA coding upstream 370916 4958341 ~ 4977418 (+)
CI01000306_04863197_04868703 NA coding upstream 479540 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 486764 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 554180 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 595233 4686121 ~ 4753101 (+)
CI01000306_05358831_05362667 NA coding downstream 10084 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 19167 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 40826 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 50567 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 107413 5456160 ~ 5473514 (+)
G433021 NA non-coding upstream 593 5346993 ~ 5347741 (+)
G433020 NA non-coding upstream 1668 5346445 ~ 5346666 (+)
G433019 NA non-coding upstream 1901 5346028 ~ 5346433 (+)
G433006 NA non-coding upstream 2410 5339775 ~ 5345924 (+)
G433005 NA non-coding upstream 10990 5337021 ~ 5337344 (+)
G433023 NA non-coding downstream 136 5348883 ~ 5349286 (+)
G433024 NA non-coding downstream 824 5349571 ~ 5349773 (+)
G433025 NA non-coding downstream 1110 5349857 ~ 5350870 (+)
G433026 NA non-coding downstream 2267 5351014 ~ 5351327 (+)
G433027 NA non-coding downstream 2622 5351369 ~ 5352445 (+)
G432678 NA other upstream 825798 4522182 ~ 4522536 (+)
G432583 NA other upstream 1020512 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1539336 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1565315 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1570784 3772689 ~ 3777550 (+)
G432958 NA other downstream 310181 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 631766 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 757396 6106143 ~ 6108175 (+)
G433724 NA other downstream 759864 6108611 ~ 6129778 (+)
G434545 NA other downstream 1770570 7119317 ~ 7119859 (+)

Expression


Co-expression Network