G433025


Basic Information

Item Value
gene id G433025
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5349857 ~ 5350870 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497207
TCTCAGTCGTCGCACATCGGGGGAGAGCTACGGGTATCGTCACGGCAACAACACAGGCCATGGGTGACAGCGCAATAATATGGTAACATGGAGAGGAAGGAAGGAAGGGTAAGCATAAAAGTGAGGAAAACCAAGGGATGAGGGCAAGGCAAAATCAGGATCAATCACAAAAGCAAAAGCAAAAGCTAGTGAAATGACTGGCAACAGGGGCGTGACTTAATTCTTAAGTCAAAACAGCATGGGATAGACAGAGGAAGGTAAAATTATGACAGCATGCATGCACACCCTCGCTAATGCGAATCTCAGACAAGCACCTACTCATTTCTAAAATAAAGCCACAGGCTGCGTCCAAAACAGAGGTAGGAAGTCGTTTCGTGCTAATCCATTGTTTGTGAAACATCCTGTCAAATAGGATGCTGATCTTTTTTCCAAGAATGTATCTTGCTACCTTCACTGCCTCTGATATTCCTGAATCAGTAAATATTGCATCTGATGGAGCATTCGAAACATTTTAGAATATAAAAAAAATAAGAAGTTATATTGTTAAAAAGTTTGGGGTTGATAAGATTTTATAATGTTTTTGAAATGTTTTGTTTCTTATGCACAACAAAAATACAGGAAAACAGTAAAATACAGAAATTTTTCTAATTCTTAATATATTTTAAAACCTAATTTATTCCTGTGATGGCAATGCTGAATTTTCAGCAGCCATTACATTAGTCTTCAGTGTCACATGATCCTTCAAAAATCATTCTAATATGCTGATTTACTGCTCAATAAATTATATATTATCATTAATGTTGAACATAGTTGTGCTGCTTAATATTTTTGTGGAGACTGAAACATTTTTCCGGTTTCTTAGATAAATAGAAAGTTCAAAAGAACAGCATTTGTTTGAAATGCAAATCCTTTGTAACAGGTAAAAGACTTTACTGTTACTTTTGATCAATTAAATAGATCCTTGCTAAATAAAAACGACCTTTTTGAAGGATAGTGTATATTCATAAATATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497207 True 1014 lncRNA 0.35 1 5349857 5350870

Neighbor

gene id symbol gene type direction distance location
CI01000306_04958429_04977273 NA coding upstream 372439 4958341 ~ 4977418 (+)
CI01000306_04863197_04868703 NA coding upstream 481063 4863197 ~ 4868794 (+)
CI01000306_04859604_04861501 NA coding upstream 488287 4859538 ~ 4861570 (+)
CI01000306_04789240_04793134 LRRC38, LRRC38A coding upstream 555703 4788170 ~ 4794154 (+)
CI01000306_04686121_04753101 EPHB2, EPHB2B coding upstream 596756 4686121 ~ 4753101 (+)
CI01000306_05358831_05362667 NA coding downstream 7961 5358831 ~ 5362710 (+)
CI01000306_05368199_05371572 NA coding downstream 17044 5367914 ~ 5371880 (+)
CI01000306_05390270_05392867 NA coding downstream 38703 5389573 ~ 5393074 (+)
CI01000306_05399614_05410516 NA coding downstream 48444 5399314 ~ 5410886 (+)
CI01000306_05456160_05473514 NA coding downstream 105290 5456160 ~ 5473514 (+)
G433024 NA non-coding upstream 84 5349571 ~ 5349773 (+)
G433023 NA non-coding upstream 571 5348883 ~ 5349286 (+)
G433022 NA non-coding upstream 1110 5348334 ~ 5348747 (+)
G433021 NA non-coding upstream 2116 5346993 ~ 5347741 (+)
G433020 NA non-coding upstream 3191 5346445 ~ 5346666 (+)
G433026 NA non-coding downstream 144 5351014 ~ 5351327 (+)
G433027 NA non-coding downstream 499 5351369 ~ 5352445 (+)
G433028 NA non-coding downstream 1608 5352478 ~ 5352808 (+)
G432984 NA non-coding downstream 2512 5353382 ~ 5355406 (+)
G432988 NA non-coding downstream 5161 5356031 ~ 5358285 (+)
G432678 NA other upstream 827321 4522182 ~ 4522536 (+)
G432583 NA other upstream 1022035 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1540859 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1566838 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1572307 3772689 ~ 3777550 (+)
G432958 NA other downstream 308058 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 629643 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 755273 6106143 ~ 6108175 (+)
G433724 NA other downstream 757741 6108611 ~ 6129778 (+)
G434545 NA other downstream 1768447 7119317 ~ 7119859 (+)

Expression


Co-expression Network