G432970


Basic Information

Item Value
gene id G432970
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5522161 ~ 5522923 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497152
CCTGAATAGTGTGCACCTGCTGCATTAGTAAGTCACAATACAGACGCAGCTCTGACATCTTAGTTTTCAGTGATTCTGTGGTTTCTGTTAACTCCCCTTTCTTTTTTGGTTCGAGTGTCAATTAGTCCAGCTTTGGAGCTCCCCAGAGCCACCAGCCACTTCTGCCTCTCAGCTGCATTTACAGCCTTCACATAAAAATGCTGCTCCCCTGGTATGATCAGCTCCAGACGCGTACTGTCAGTTGGGTGAACTGGAGAAAACATGAGGAAGTAAAAAATTACAAAAGAATAACCAGTTTATTTTCTTGTAAGGACAGAAGGAATTTTTTTCTGATAAGATATACGATAATCTCACCTTTAATTTCACATACTGACATCTTAATACTGCCTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497152 True 393 lncRNA 0.41 2 5522161 5522923

Neighbor

gene id symbol gene type direction distance location
CI01000306_05510550_05518436 GUCY1B2 coding upstream 3207 5510550 ~ 5518954 (+)
CI01000306_05456160_05473514 NA coding upstream 48647 5456160 ~ 5473514 (+)
CI01000306_05399614_05410516 NA coding upstream 111275 5399314 ~ 5410886 (+)
CI01000306_05390270_05392867 NA coding upstream 129087 5389573 ~ 5393074 (+)
CI01000306_05368199_05371572 NA coding upstream 150281 5367914 ~ 5371880 (+)
CI01000306_05525004_05533724 RPGRB coding downstream 2081 5525004 ~ 5533724 (+)
CI01000306_05568573_05569674 NA coding downstream 45448 5568371 ~ 5569988 (+)
CI01000306_05581415_05587605 GRPR coding downstream 58345 5581268 ~ 5587661 (+)
CI01000306_05617258_05617548 NA coding downstream 94335 5617258 ~ 5618090 (+)
CI01000306_05650597_05655729 NA coding downstream 127674 5650597 ~ 5655953 (+)
G433064 NA non-coding upstream 17007 5504912 ~ 5505154 (+)
G433062 NA non-coding upstream 22935 5498992 ~ 5499226 (+)
G432941 NA non-coding upstream 68735 5448791 ~ 5453426 (+)
G432992 NA non-coding upstream 93012 5427886 ~ 5429149 (+)
G432988 NA non-coding upstream 163876 5356031 ~ 5358285 (+)
G433065 NA non-coding downstream 40495 5563418 ~ 5563672 (+)
G433066 NA non-coding downstream 42104 5565027 ~ 5565238 (+)
G433070 NA non-coding downstream 50678 5573601 ~ 5574073 (+)
G432947 NA non-coding downstream 141992 5664915 ~ 5673295 (+)
CI01000306_05755968_05757253 NA non-coding downstream 228746 5755779 ~ 5757390 (+)
G432678 NA other upstream 999625 4522182 ~ 4522536 (+)
G432583 NA other upstream 1194339 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1713163 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1739142 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1744611 3772689 ~ 3777550 (+)
G432958 NA other downstream 136005 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 457590 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 583220 6106143 ~ 6108175 (+)
G433724 NA other downstream 585688 6108611 ~ 6129778 (+)
G434545 NA other downstream 1596394 7119317 ~ 7119859 (+)

Expression


Co-expression Network