G433550



Basic Information


Item Value
gene id G433550
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5525168 ~ 5526352 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU497790
CACACTTTCTGATTTTAGAGCTTTCACACAAGTGGGTTTATTCACAGTGGTTTTTGTTCCGAGGCCCAGCTGTCCCCAGTTATTGCTGCCAAACATAAACAGCTTCCCATTTTCTAAACACAATACGAATAGTGACAGGATGAATGCATAAAATGATGGAATAAGACTTTAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU497790 True 172 lncRNA 0.39 2 5525168 5526352

Neighbor


gene id symbol gene type direction distance location
CI01000306_05520026_05523437 PLEKHA3 coding downstream 1731 5519992 ~ 5523437 (-)
CI01000306_05506906_05508492 NA coding downstream 16511 5506132 ~ 5508657 (-)
CI01000306_05476895_05478400 NR0B1 coding downstream 46603 5476396 ~ 5478565 (-)
CI01000306_05452986_05453456 RPL22 coding downstream 71712 5452864 ~ 5453456 (-)
CI01000306_05414347_05434965 CHD5 coding downstream 90203 5414271 ~ 5434965 (-)
CI01000306_05544881_05552941 CYBB, GP91PHOX coding upstream 18160 5544512 ~ 5552941 (-)
CI01000306_05555926_05562924 XK coding upstream 29574 5555926 ~ 5562949 (-)
CI01000306_05606914_05611346 FIGF, VEGFD coding upstream 80253 5606605 ~ 5611346 (-)
CI01000306_05619706_05631189 PIR coding upstream 93284 5619636 ~ 5631189 (-)
CI01000306_05631903_05640235 NA coding upstream 105381 5631733 ~ 5640235 (-)
G433527 NA non-coding downstream 6789 5517830 ~ 5518379 (-)
G433541 NA non-coding downstream 25594 5499341 ~ 5499574 (-)
G433539 NA non-coding downstream 26984 5497974 ~ 5498184 (-)
G433536 NA non-coding downstream 34012 5490935 ~ 5491156 (-)
G433518 NA non-coding upstream 37066 5563418 ~ 5563669 (-)
G433561 NA non-coding upstream 41563 5567915 ~ 5590563 (-)
G433583 NA non-coding upstream 147060 5673412 ~ 5673651 (-)
G433595 NA non-coding upstream 231846 5758198 ~ 5815869 (-)
G433617 NA non-coding upstream 261381 5787733 ~ 5788071 (-)
G433450 NA other downstream 141405 5361643 ~ 5383763 (-)
CI01000306_04544349_04545034 NA other downstream 980076 4542723 ~ 4545244 (-)
G432022 NA other downstream 2521277 3000236 ~ 3003891 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other downstream 3776218 1717933 ~ 1726043 (-)
G431814 NA other downstream 4212734 1311702 ~ 1312434 (-)
G433670 NA other upstream 514662 6041014 ~ 6041283 (-)
G433985 NA other upstream 669755 6196107 ~ 6197210 (-)
G434016 NA other upstream 828828 6355180 ~ 6361643 (-)
G434086 NA other upstream 911054 6437406 ~ 6452251 (-)
G434338 NA other upstream 1340304 6866656 ~ 6866936 (-)

Expression



Co-expression Network