G433066


Basic Information

Item Value
gene id G433066
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 5565027 ~ 5565238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU497249
CACGTAAAATCACAGAGCGGGGTCAGCGCATGCTGAGGCGCACAGTGCGCAGAAGTCGCCAACTTTCTGCAGAGTCAATAGCTACAGACCTCCAAACTTCATGTGGCCTTCAGATTAGCTCAAGAACAGTGCATAGAGAGCTTCATGGAATGGGTTTCCATGGCCGAGCAGCTGCATCCAAGCCTTACATCACCAAGTGCAATGCAAAGCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU497249 True 212 lncRNA 0.51 1 5565027 5565238

Neighbor

gene id symbol gene type direction distance location
CI01000306_05525004_05533724 RPGRB coding upstream 31303 5525004 ~ 5533724 (+)
CI01000306_05510550_05518436 GUCY1B2 coding upstream 46073 5510550 ~ 5518954 (+)
CI01000306_05456160_05473514 NA coding upstream 91513 5456160 ~ 5473514 (+)
CI01000306_05399614_05410516 NA coding upstream 154141 5399314 ~ 5410886 (+)
CI01000306_05390270_05392867 NA coding upstream 171953 5389573 ~ 5393074 (+)
CI01000306_05568573_05569674 NA coding downstream 3133 5568371 ~ 5569988 (+)
CI01000306_05581415_05587605 GRPR coding downstream 16030 5581268 ~ 5587661 (+)
CI01000306_05617258_05617548 NA coding downstream 52020 5617258 ~ 5618090 (+)
CI01000306_05650597_05655729 NA coding downstream 85359 5650597 ~ 5655953 (+)
CI01000306_05680240_05680527 NA coding downstream 114508 5679746 ~ 5681035 (+)
G433065 NA non-coding upstream 1355 5563418 ~ 5563672 (+)
G432970 NA non-coding upstream 42104 5522161 ~ 5522923 (+)
G433064 NA non-coding upstream 59873 5504912 ~ 5505154 (+)
G433062 NA non-coding upstream 65801 5498992 ~ 5499226 (+)
G432941 NA non-coding upstream 111601 5448791 ~ 5453426 (+)
G433070 NA non-coding downstream 8363 5573601 ~ 5574073 (+)
G432947 NA non-coding downstream 99677 5664915 ~ 5673295 (+)
CI01000306_05755968_05757253 NA non-coding downstream 186431 5755779 ~ 5757390 (+)
G432991 NA non-coding downstream 319962 5885200 ~ 5887156 (+)
G433120 NA non-coding downstream 325723 5890961 ~ 5891184 (+)
G432678 NA other upstream 1042491 4522182 ~ 4522536 (+)
G432583 NA other upstream 1237205 4326402 ~ 4327822 (+)
CI01000306_03807268_03810946 NA other upstream 1756029 3807268 ~ 3811243 (+)
CI01000306_03778075_03781910 MAP1LC3A, MAP1LC3A.L other upstream 1782008 3778052 ~ 3783019 (+)
CI01000306_03772689_03777211 DYNLRB1 other upstream 1787477 3772689 ~ 3777550 (+)
G432958 NA other downstream 93690 5658928 ~ 5660169 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other downstream 415275 5975822 ~ 5986288 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other downstream 540905 6106143 ~ 6108175 (+)
G433724 NA other downstream 543373 6108611 ~ 6129778 (+)
G434545 NA other downstream 1554079 7119317 ~ 7119859 (+)

Expression


Co-expression Network