XLOC_012819 (fkbp16)


Basic Information

Item Value
gene id XLOC_012819
gene name fkbp16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 25653599 ~ 25745636 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025580
ggagaataaagaggcAGAAGAGAGTGAAGAAGAGTTTGCTGAAAGCTTTACAGATGCTAATGCCTCCACCAGTTACCCAACAAATGAGCCCATTACTTCAAAAACCCACATCGGCCCACCTAAATCCATTGAATCCAATCCAATGGAGGACAGAGGAAAACTGTCTAAGACTCCCAGCTTTGGGAAAATGGTTCGGTTTAAGGAAATTGAAGTAGTGGAGGAAAGGGACACCTCAGACGACACTCTTTTTCCAGACTTTGACATGGAAGAGTGGACCACCAGCAGGTTTGAGGAGCTTTTTCTGGCAGACGACTGGAAGAACATTACAGATGACTGTCTGCTAAAGAAAAAAGTGTTACAGGCCGGTCCCGAGAATGCCCTGACCCCGGCTTGGGGTCAAGAGGTCACACTGAAAATGCAGGGTGTGCTTGAGGACAGGACTGTGGTGGAGAAAGACAGTAAACTGGTCTTCATTATTGGAGAGGGAGATGTCACCCAGGCCCTGGAAGAGTGTGCCATTACAATGAAGAAAGGAGAGATTGCTTTACTTCTTGCAGATTCACAATACACCTACGGACTCCTGGGAAgGGAGCCTGATATACCAGCCTGGGCTCCTCTCCTGTATCAGCTACAGCTTCTAGACTTCAGAGAAAAGCCAGACCCTCTTTTACTGCCCGTACCTGACCGGATCCGCATTGGCAACCAGAAACGAGAGCGAGGAAATTTCTACTTCCAGAGGGAAGAGTTCAGCAAGGCAGTACAGGCTTACTGCATGGCTCTAGATGTGCTTACAACGCGCACAAATGATGGTCAAAACTGTGTGgcagaggaagaagaagaagtgaACGATTATCGAGTGAAATGTCTGAATAATCTGGCAGCAGCACAGCTGAAGCTTGGACATTTCGATGAGGCGCTGCACACCAGTCAAGATGTGCTGTTTCTGGATCCCCAGAACGTCAAAGCATTGTTCAGGAAAGGAAAGCTTTTATCAGACAAGGGCGAGTATGAGGAGGCCATGGAGACCTTGAAGAAGGCTTTGAAACTGGAGCCATCAACCAAGGCTATTCATGCTGAACTTTCCAAACTGGTCAAAAGACAGGCGGGGGAAAATGAGAGCCAGAACTGGCAAGCTAAACCAGCTCGAGTGTTCGGCGAAAACATTGCGCCCTTTCTGACACCTCCTCCCAAAAAGAAGCCGTTTGGAATTTCTTGGAAGTTTCTGCTCGGAGCTCTGGTGGTGGCATTGGGCAGTTTAGTCACATCTGTGGTCCTGACCGCACGGAACTAGCTCTGTCGACTGACTTGCAAATTAACTACAAGTCTCACAAACTAACATTCCGCAGAACTGCCAAGGGACGAAGGGAAAAATGCACTGAACTGTTTAAAGAACAGTTTGGGCAGCTCTGCCGGTAGCACACCGACTTAAGCAAAGCAGAATGTACCCACAGAGAAAAGGGCCAAGCAAATGCATTCCAAATATCTGCAATAAAAACAGACTATTACCAT

Function

symbol description
fkbp16 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in epiphysis; retina; and telencephalon.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016853 isomerase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-116 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in epiphysis; retina; and telencephalon.

Ensembl:

ensembl_id ENSDARG00000001976

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025580 True 1509 mRNA 0.48 8 25653599 25745636

Neighbor

gene id symbol gene type direction distance location
XLOC_012818 pex11a coding upstream 102639 25546227 ~ 25550960 (+)
XLOC_012816 NA coding upstream 153991 25477794 ~ 25499608 (+)
XLOC_012817 NA coding upstream 156988 25492411 ~ 25496611 (+)
XLOC_012815 si:dkeyp-59c12.1 coding upstream 426895 25225524 ~ 25226704 (+)
XLOC_012814 fam174b coding upstream 643933 25003207 ~ 25009666 (+)
XLOC_012820 si:ch211-39k3.2 coding downstream 6956 25752592 ~ 25754918 (+)
XLOC_012821 znf710a coding downstream 302492 26048128 ~ 26094678 (+)
XLOC_012822 RASGRF1 coding downstream 592233 26337869 ~ 26418637 (+)
XLOC_012823 ctsh coding downstream 676488 26422124 ~ 26428525 (+)
XLOC_012824 blm coding downstream 683193 26428829 ~ 26453729 (+)
XLOC_012812 AL935295.1 non-coding upstream 912878 24737234 ~ 24740721 (+)
XLOC_012811 CT030043.1 non-coding upstream 1010497 24642987 ~ 24643102 (+)
XLOC_012809 CR847971.1 non-coding upstream 1170314 24477526 ~ 24483285 (+)
XLOC_012825 NA non-coding downstream 711045 26456681 ~ 26461427 (+)
XLOC_012828 AL935332.1 non-coding downstream 1002175 26747811 ~ 26747927 (+)
XLOC_012832 NA non-coding downstream 1251940 26997576 ~ 26998589 (+)
XLOC_012835 BX640463.2 non-coding downstream 1450574 27196210 ~ 27196326 (+)
XLOC_012841 BX649600.1 non-coding downstream 1991088 27736724 ~ 27736840 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_01054174_01110208 FKBP16 coding CI01000013 null 1054137 ~ 1110466 (-)