G433985


Basic Information

Item Value
gene id G433985
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6196107 ~ 6197210 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU498286
CGTTGAATGAGGGGTAAATCGGGGGCATATCTATGGCAGTGTGGTCGAGTTTGCTGGGGGTTTTGGTGGAGTCTGTCAGAATGAGACTGCTGTCATGGAAATCTGGTCCACGCAGGTTCAGCAGGTTATTGGCCTGCTCTGGGTCACAGTAGGGGTCATAAAGATCGGGATCAGGGTCATGGATGGCCATCTTGCTACTGTTTCGCAGGTTGTCCAGATCCTCACTGTACTGGCTCTCCGTGTGTGGAAGACCTGGCTGAATTGGACGAGCCGTTGACAAACTAGCCTCTTTTCTAGCTTGATGCTGTCGACTCCGTTCCCTATCCCTCCTTCCATCTCCATCCCCATGGTTTCCATGGCGATGCCTCCTCTGCCTCTTCTCTTGGCCCTCCTCCCCATCTCCTCCTGTCTCTCCTCTGCTGTGGTGTTCTCTGTGTCTTCTTCCTCTTTCTCCTCCATCTTCATCCCTCCTTCTGTGCTGGTGGTGTCGGGGTCGCCTGTGTTCCCCTGTGCCCTCCACGTCCTCGCCTCCTCTCTGGGCATATTCGCACCCTGTCTCACCCAGGTCTGGGTGGTGTAGGGACTGGCGGCTGGAGTGGGTATGATGGTGGTGGTGATGATGATGACTGTGATGGTGATGGTATCGGGGCTGGTGCTGCAGGTATTCTTCACCCCTCTGCTGGTTCAGCTCCTGGGGGTTTGGTTCACCCGGTCGGGGCTTGTTGGTATTGTTGTTGCGGTTCTCCTGAGGATTAACAACTAGTGGGCGGTCCAAGTGGGTCTTCATGTCAGGACGGTTGCGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU498286 True 806 TUCP 0.56 2 6196107 6197210

Neighbor

gene id symbol gene type direction distance location
CI01000306_06108667_06110250 NA coding downstream 85857 6108258 ~ 6110250 (-)
CI01000306_06048083_06049632 NA coding downstream 146475 6047839 ~ 6049632 (-)
CI01000306_05990444_06033972 NCX, SLC8A1, SLC8A1A, SLC8A1B coding downstream 162135 5989253 ~ 6033972 (-)
CI01000306_05902120_05929983 MAP4K3A coding downstream 266124 5901798 ~ 5929983 (-)
CI01000306_05891607_05897232 PECR coding downstream 298782 5891573 ~ 5897325 (-)
CI01000306_06244021_06244397 NA coding upstream 46725 6243935 ~ 6244397 (-)
CI01000306_06253870_06254391 NA coding upstream 56136 6253346 ~ 6256066 (-)
CI01000306_06273326_06277287 NACC1 coding upstream 75205 6272415 ~ 6277442 (-)
CI01000306_06289571_06299875 MAN2B1 coding upstream 91938 6289148 ~ 6300251 (-)
CI01000306_06336883_06339725 NA coding upstream 139441 6336651 ~ 6341662 (-)
G433948 NA non-coding downstream 56411 6138677 ~ 6139696 (-)
G433939 NA non-coding downstream 88543 6103839 ~ 6107564 (-)
G433940 NA non-coding downstream 141473 6051805 ~ 6054634 (-)
G433633 NA non-coding downstream 168050 6011659 ~ 6028057 (-)
G433628 NA non-coding downstream 308975 5885203 ~ 5887132 (-)
G434001 NA non-coding upstream 59795 6257005 ~ 6257347 (-)
G434064 NA non-coding upstream 209315 6406525 ~ 6406767 (-)
G434073 NA non-coding upstream 216543 6413753 ~ 6414174 (-)
G434079 NA non-coding upstream 228500 6425710 ~ 6425956 (-)
G433670 NA other downstream 154824 6041014 ~ 6041283 (-)
G433450 NA other downstream 812344 5361643 ~ 5383763 (-)
CI01000306_04544349_04545034 NA other downstream 1651015 4542723 ~ 4545244 (-)
G432022 NA other downstream 3192216 3000236 ~ 3003891 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other downstream 4447157 1717933 ~ 1726043 (-)
G434016 NA other upstream 157970 6355180 ~ 6361643 (-)
G434086 NA other upstream 240196 6437406 ~ 6452251 (-)
G434338 NA other upstream 669446 6866656 ~ 6866936 (-)
G436446 NA other upstream 3459069 9656279 ~ 9671776 (-)
G436626 NA other upstream 3637815 9835025 ~ 9836323 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G99937 NA non-coding CM030132.1 CM030132.1 17802158 ~ 17803919 (-)
tiger barb (Puntius tetrazona) G84236 LOC107751115,LOC107695065,LOC107556305,LOC107570979,LOC107737248,LOC107691280 unknown NC_056709.1 CM032078.1 23392564 ~ 23393723 (-)