G433753


Basic Information

Item Value
gene id G433753
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6411156 ~ 6411558 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU498039
GTCGAATGCGTGAGGATCCATTTGCAGCTTGTTTATTAAAAGTACTTACAGAGTAGACAGGGCAAAGGCAGAGACACAAACAGGGACAGGCAATGGTCGAGGCAGGCGGCAGACAAGCACAGTCCAATGGCAACAGAAATACAATCCACAAGAAAACGCTCAGAAGTGATCACCGGGGCAAATCAAGACTTCGCAAAGGGTGTGTGTGTGTGTGTGTGTCTTAAATAGTCCAGGTAATGATCTGCAGGTGTGTGTGGCAATTGGTGATTGGTGCATGTGATTGGAAGGGAGGATTATGGGAAGTGGAGTCCAGGAACTGACAGGAACAGACAGTGATCGTGACAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU498039 True 347 lncRNA 0.48 2 6411156 6411558

Neighbor

gene id symbol gene type direction distance location
CI01000306_06355528_06390936 SIPA1L2 coding upstream 19967 6354708 ~ 6391189 (+)
CI01000306_06303064_06327102 NA coding upstream 83679 6302557 ~ 6327477 (+)
CI01000306_06281314_06288766 TRMT1 coding upstream 122103 6281014 ~ 6289053 (+)
CI01000306_06258779_06262616 STX10 coding upstream 146853 6257089 ~ 6264303 (+)
CI01000306_06139324_06242205 CACNA1AB, CACNA1A coding upstream 168951 6139324 ~ 6242205 (+)
CI01000306_06426490_06435408 NA coding downstream 12217 6423775 ~ 6435558 (+)
CI01000306_06437636_06441233 NA coding downstream 25068 6436626 ~ 6441267 (+)
CI01000306_06463911_06469485 NA coding downstream 51655 6463213 ~ 6469917 (+)
CI01000306_06479829_06485192 NA coding downstream 68271 6479829 ~ 6485192 (+)
CI01000306_06523680_06551842 NA coding downstream 111532 6523090 ~ 6552089 (+)
G433715 NA non-coding upstream 134008 6275371 ~ 6277148 (+)
G433709 NA non-coding upstream 140618 6269358 ~ 6270538 (+)
G433705 NA non-coding upstream 142200 6267641 ~ 6268956 (+)
G433683 NA non-coding upstream 156662 6253305 ~ 6254494 (+)
G433702 NA non-coding upstream 203651 6201943 ~ 6207505 (+)
G433765 NA non-coding downstream 18386 6429944 ~ 6430144 (+)
G433706 NA non-coding downstream 49648 6461206 ~ 6462044 (+)
G433710 NA non-coding downstream 78891 6490449 ~ 6490831 (+)
G433796 NA non-coding downstream 186407 6597965 ~ 6598562 (+)
G433724 NA other upstream 281378 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 302981 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 424868 5975822 ~ 5986288 (+)
G432958 NA other upstream 750987 5658928 ~ 5660169 (+)
G432678 NA other upstream 1888620 4522182 ~ 4522536 (+)
G434545 NA other downstream 707759 7119317 ~ 7119859 (+)
CI01000306_09225597_09230504 NA other downstream 2814007 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 2862341 9263589 ~ 9289035 (+)
G435590 NA other downstream 3301291 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 3448655 9860480 ~ 9865724 (+)

Expression


Co-expression Network