G433796


Basic Information

Item Value
gene id G433796
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6597965 ~ 6598562 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU498082
TATACCTATGATAAATGCAAAAGAAAGTGAAACTGCTCTCAGGCTGAACTGGTGCTATTTTCTATTATATATTTTCCATTTTTCCCTTATACACACACAAATATGAAATGTTGGAGAAATGCAATAATGCTTTTAAATATGAAACTAAGGGTGTACTCACACTAGGCGCTCTGAACCGTGCCTGAGCACGTTTGACCCCCAAAGCCCGGTTCGTTTGACAAGTGTGATCTCTCCGTTCCGTGCCTGGGCGCGGTTCGTTTAGCTGGCCCTGGCCCGCTTGGAAGAGGTGGGCCAGAGCGCGGTTCGGTTGGGCTCGAGTGCGGTTCGCATGCAGTGTGAGTGCTAACCGTGCCTGAGCACGGAACAGTTACAACTTTTGTGTGCGCTACTGTCATCATTATGACGGCAAACATCTTTATTACTACTTTGATAGTACACTTATCAATTAATGTAATTAATTCGAGTGTATTTGGGTTTATAATGGGTCTGATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU498082 True 493 lncRNA 0.44 2 6597965 6598562

Neighbor

gene id symbol gene type direction distance location
CI01000306_06564978_06573507 NA coding upstream 24174 6564978 ~ 6573791 (+)
CI01000306_06523680_06551842 NA coding upstream 45876 6523090 ~ 6552089 (+)
CI01000306_06479829_06485192 NA coding upstream 112773 6479829 ~ 6485192 (+)
CI01000306_06463911_06469485 NA coding upstream 128048 6463213 ~ 6469917 (+)
CI01000306_06437636_06441233 NA coding upstream 156698 6436626 ~ 6441267 (+)
CI01000306_06722271_06723631 NA coding downstream 123709 6722271 ~ 6723908 (+)
CI01000306_07386318_07389827 NKPD1 coding downstream 787756 7386318 ~ 7390040 (+)
CI01000306_07492176_07535995 CNTNAP5L coding downstream 891731 7490293 ~ 7536956 (+)
CI01000306_07559884_07560060 NA coding downstream 961322 7559884 ~ 7560100 (+)
CI01000306_07609108_07637728 NA coding downstream 1010546 7609108 ~ 7637836 (+)
G433710 NA non-coding upstream 107134 6490449 ~ 6490831 (+)
G433706 NA non-coding upstream 135921 6461206 ~ 6462044 (+)
G433765 NA non-coding upstream 167821 6429944 ~ 6430144 (+)
CI01000306_06426490_06435408 NA non-coding upstream 171521 6423775 ~ 6435558 (+)
G433753 NA non-coding upstream 186407 6411156 ~ 6411558 (+)
G433915 NA non-coding downstream 184523 6783085 ~ 6783358 (+)
G433913 NA non-coding downstream 218806 6817368 ~ 6817870 (+)
G434318 NA non-coding downstream 239177 6837739 ~ 6838047 (+)
G434321 NA non-coding downstream 242931 6841493 ~ 6841697 (+)
G434399 NA non-coding downstream 393399 6991961 ~ 6992267 (+)
G433724 NA other upstream 468187 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 489790 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 611677 5975822 ~ 5986288 (+)
G432958 NA other upstream 937796 5658928 ~ 5660169 (+)
G432678 NA other upstream 2075429 4522182 ~ 4522536 (+)
G434545 NA other downstream 520755 7119317 ~ 7119859 (+)
CI01000306_09225597_09230504 NA other downstream 2627003 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 2675337 9263589 ~ 9289035 (+)
G435590 NA other downstream 3114287 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 3261651 9860480 ~ 9865724 (+)

Expression


Co-expression Network