G434399


Basic Information

Item Value
gene id G434399
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 6991961 ~ 6992267 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU498740
CTGAAATTCTTATTGTGTATAAAAGTTACACAGATTAGCTCTAGTTTGTCACACTTTACAAAAAAATAAAAAAATAAAAAAAAATAAAAAAAAAAATACGTTCCAACAATCAAGCTCTTTTTGCTGAGCATTATGCTCCAGACCACCTGGAACCAGAACACTTTGTACAAGTGAGCAAATACTACTATCTTTAATGGGCCAAAAAACACACACCCCACATTATGCAAAGAGGGATGATGTTTATGTTATAAGCCTTGTCTGTCATTTTAGTAAAGCTGCTCTCGTGTATAAACCTGCCTGTAGGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU498740 True 307 lncRNA 0.34 1 6991961 6992267

Neighbor

gene id symbol gene type direction distance location
CI01000306_06722271_06723631 NA coding upstream 268053 6722271 ~ 6723908 (+)
CI01000306_06592383_06685440 DIAPH3 coding upstream 306521 6592383 ~ 6685440 (+)
CI01000306_06564978_06573507 NA coding upstream 418170 6564978 ~ 6573791 (+)
CI01000306_06523680_06551842 NA coding upstream 439872 6523090 ~ 6552089 (+)
CI01000306_06479829_06485192 NA coding upstream 506769 6479829 ~ 6485192 (+)
CI01000306_07386318_07389827 NKPD1 coding downstream 394051 7386318 ~ 7390040 (+)
CI01000306_07492176_07535995 CNTNAP5L coding downstream 498026 7490293 ~ 7536956 (+)
CI01000306_07559884_07560060 NA coding downstream 567617 7559884 ~ 7560100 (+)
CI01000306_07609108_07637728 NA coding downstream 616841 7609108 ~ 7637836 (+)
CI01000306_07640049_07676915 SPOPLB, SPOPL, SPOPLA coding downstream 647782 7640049 ~ 7677784 (+)
G434321 NA non-coding upstream 150264 6841493 ~ 6841697 (+)
G434318 NA non-coding upstream 153914 6837739 ~ 6838047 (+)
G433913 NA non-coding upstream 174091 6817368 ~ 6817870 (+)
G433915 NA non-coding upstream 208603 6783085 ~ 6783358 (+)
G433796 NA non-coding upstream 393399 6597965 ~ 6598562 (+)
G434400 NA non-coding downstream 2043 6994310 ~ 6994537 (+)
G434437 NA non-coding downstream 68813 7061080 ~ 7062538 (+)
G434518 NA non-coding downstream 101442 7093709 ~ 7093927 (+)
G434531 NA non-coding downstream 116065 7108332 ~ 7108721 (+)
G434596 NA non-coding downstream 194096 7186363 ~ 7186833 (+)
G433724 NA other upstream 862183 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 883786 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 1005673 5975822 ~ 5986288 (+)
G432958 NA other upstream 1331792 5658928 ~ 5660169 (+)
G432678 NA other upstream 2469425 4522182 ~ 4522536 (+)
G434545 NA other downstream 127050 7119317 ~ 7119859 (+)
CI01000306_09225597_09230504 NA other downstream 2233298 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 2281632 9263589 ~ 9289035 (+)
G435590 NA other downstream 2720582 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 2867946 9860480 ~ 9865724 (+)

Expression


Co-expression Network