Gene
RNA
| Item | Value |
|---|---|
| gene id | G434437 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 7061080 ~ 7062538 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU498780 | True | 664 | lncRNA | 0.38 | 2 | 7061080 | 7062538 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_06722271_06723631 | NA | coding | upstream | 337172 | 6722271 ~ 6723908 (+) |
| CI01000306_06592383_06685440 | DIAPH3 | coding | upstream | 375640 | 6592383 ~ 6685440 (+) |
| CI01000306_06564978_06573507 | NA | coding | upstream | 487289 | 6564978 ~ 6573791 (+) |
| CI01000306_06523680_06551842 | NA | coding | upstream | 508991 | 6523090 ~ 6552089 (+) |
| CI01000306_06479829_06485192 | NA | coding | upstream | 575888 | 6479829 ~ 6485192 (+) |
| CI01000306_07386318_07389827 | NKPD1 | coding | downstream | 323780 | 7386318 ~ 7390040 (+) |
| CI01000306_07492176_07535995 | CNTNAP5L | coding | downstream | 427755 | 7490293 ~ 7536956 (+) |
| CI01000306_07559884_07560060 | NA | coding | downstream | 497346 | 7559884 ~ 7560100 (+) |
| CI01000306_07609108_07637728 | NA | coding | downstream | 546570 | 7609108 ~ 7637836 (+) |
| CI01000306_07640049_07676915 | SPOPLB, SPOPL, SPOPLA | coding | downstream | 577511 | 7640049 ~ 7677784 (+) |
| G434400 | NA | non-coding | upstream | 66543 | 6994310 ~ 6994537 (+) |
| G434399 | NA | non-coding | upstream | 68813 | 6991961 ~ 6992267 (+) |
| G434321 | NA | non-coding | upstream | 219383 | 6841493 ~ 6841697 (+) |
| G434318 | NA | non-coding | upstream | 223033 | 6837739 ~ 6838047 (+) |
| G433913 | NA | non-coding | upstream | 243210 | 6817368 ~ 6817870 (+) |
| G434518 | NA | non-coding | downstream | 31171 | 7093709 ~ 7093927 (+) |
| G434531 | NA | non-coding | downstream | 45794 | 7108332 ~ 7108721 (+) |
| G434596 | NA | non-coding | downstream | 123825 | 7186363 ~ 7186833 (+) |
| G434629 | NA | non-coding | downstream | 154712 | 7217250 ~ 7217472 (+) |
| G434643 | NA | non-coding | downstream | 176337 | 7238875 ~ 7239139 (+) |
| G433724 | NA | other | upstream | 931302 | 6108611 ~ 6129778 (+) |
| CI01000306_06106248_06107449 | GM2573, CS056, WDR83OS | other | upstream | 952905 | 6106143 ~ 6108175 (+) |
| CI01000306_05976516_05985251 | TMEM178A, TMEM178 | other | upstream | 1074792 | 5975822 ~ 5986288 (+) |
| G432958 | NA | other | upstream | 1400911 | 5658928 ~ 5660169 (+) |
| G432678 | NA | other | upstream | 2538544 | 4522182 ~ 4522536 (+) |
| G434545 | NA | other | downstream | 56779 | 7119317 ~ 7119859 (+) |
| CI01000306_09225597_09230504 | NA | other | downstream | 2163027 | 9225512 ~ 9231333 (+) |
| CI01000306_09263755_09288503 | NA | other | downstream | 2211361 | 9263589 ~ 9289035 (+) |
| G435590 | NA | other | downstream | 2650311 | 9704707 ~ 9737144 (+) |
| CI01000306_09860935_09865155 | SH2D5 | other | downstream | 2797675 | 9860480 ~ 9865724 (+) |
