G434643


Basic Information

Item Value
gene id G434643
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 7238875 ~ 7239139 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU498993
ACAGTACTCTCCCAGATAATGGGAGTCCTGCAAGTGTGTGCAATACATCTTAAACATCGGTCCTTCACCTTTCATTGTAAACTATCCATTTGGGTAGAACAGTGTTGTGGCAGCCGTTTTCCCCTGAGCGTTATATGCGCCCTGTCGTTATCCTTTCATATGATGTCTTTAAAATGAGCGGTGTGCTCCGGCGTGACACGTTCGTGATTGCGCCTGGTTAATCTCCCGATCAGGACCGTCTATCTGCCGCGTGACCACATTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU498993 True 265 lncRNA 0.48 1 7238875 7239139

Neighbor

gene id symbol gene type direction distance location
CI01000306_06722271_06723631 NA coding upstream 514967 6722271 ~ 6723908 (+)
CI01000306_06592383_06685440 DIAPH3 coding upstream 553435 6592383 ~ 6685440 (+)
CI01000306_06564978_06573507 NA coding upstream 665084 6564978 ~ 6573791 (+)
CI01000306_06523680_06551842 NA coding upstream 686786 6523090 ~ 6552089 (+)
CI01000306_06479829_06485192 NA coding upstream 753683 6479829 ~ 6485192 (+)
CI01000306_07386318_07389827 NKPD1 coding downstream 147179 7386318 ~ 7390040 (+)
CI01000306_07492176_07535995 CNTNAP5L coding downstream 251154 7490293 ~ 7536956 (+)
CI01000306_07559884_07560060 NA coding downstream 320745 7559884 ~ 7560100 (+)
CI01000306_07609108_07637728 NA coding downstream 369969 7609108 ~ 7637836 (+)
CI01000306_07640049_07676915 SPOPLB, SPOPL, SPOPLA coding downstream 400910 7640049 ~ 7677784 (+)
G434629 NA non-coding upstream 21403 7217250 ~ 7217472 (+)
G434596 NA non-coding upstream 52042 7186363 ~ 7186833 (+)
G434531 NA non-coding upstream 130154 7108332 ~ 7108721 (+)
G434518 NA non-coding upstream 144948 7093709 ~ 7093927 (+)
G434437 NA non-coding upstream 176337 7061080 ~ 7062538 (+)
G434645 NA non-coding downstream 4546 7243685 ~ 7244333 (+)
G434647 NA non-coding downstream 7161 7246300 ~ 7246584 (+)
G434654 NA non-coding downstream 13600 7252739 ~ 7252942 (+)
G434658 NA non-coding downstream 16766 7255905 ~ 7256118 (+)
G434659 NA non-coding downstream 17699 7256838 ~ 7257037 (+)
G434545 NA other upstream 119016 7119317 ~ 7119859 (+)
G433724 NA other upstream 1109097 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 1130700 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 1252587 5975822 ~ 5986288 (+)
G432958 NA other upstream 1578706 5658928 ~ 5660169 (+)
CI01000306_09225597_09230504 NA other downstream 1986426 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 2034760 9263589 ~ 9289035 (+)
G435590 NA other downstream 2473710 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 2621074 9860480 ~ 9865724 (+)
G435639 NA other downstream 2640781 9878664 ~ 9884919 (+)

Expression


Co-expression Network