G434659


Basic Information

Item Value
gene id G434659
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 7256838 ~ 7257037 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU499009
TGAGAAGTAAAAAGTACACCATGGATCTCTGAACAAAGTCAAAATGCTCTGCCATTAGGCCCCAGGGTCAGTGTATTTATACATATTTGTCCCAAAGGGCATAATAGTTAGCCTATCAAATATTCTGGATAGAATTATTATAGTAATCGCTTGATGCCACGTAGAATGTAGGAGTAGCGTAAGCCTTGGTGAGAGTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU499009 True 200 lncRNA 0.40 1 7256838 7257037

Neighbor

gene id symbol gene type direction distance location
CI01000306_06722271_06723631 NA coding upstream 532930 6722271 ~ 6723908 (+)
CI01000306_06592383_06685440 DIAPH3 coding upstream 571398 6592383 ~ 6685440 (+)
CI01000306_06564978_06573507 NA coding upstream 683047 6564978 ~ 6573791 (+)
CI01000306_06523680_06551842 NA coding upstream 704749 6523090 ~ 6552089 (+)
CI01000306_06479829_06485192 NA coding upstream 771646 6479829 ~ 6485192 (+)
CI01000306_07386318_07389827 NKPD1 coding downstream 129281 7386318 ~ 7390040 (+)
CI01000306_07492176_07535995 CNTNAP5L coding downstream 233256 7490293 ~ 7536956 (+)
CI01000306_07559884_07560060 NA coding downstream 302847 7559884 ~ 7560100 (+)
CI01000306_07609108_07637728 NA coding downstream 352071 7609108 ~ 7637836 (+)
CI01000306_07640049_07676915 SPOPLB, SPOPL, SPOPLA coding downstream 383012 7640049 ~ 7677784 (+)
G434658 NA non-coding upstream 720 7255905 ~ 7256118 (+)
G434654 NA non-coding upstream 3896 7252739 ~ 7252942 (+)
G434647 NA non-coding upstream 10254 7246300 ~ 7246584 (+)
G434645 NA non-coding upstream 12505 7243685 ~ 7244333 (+)
G434643 NA non-coding upstream 17699 7238875 ~ 7239139 (+)
G434661 NA non-coding downstream 620 7257657 ~ 7257926 (+)
G434662 NA non-coding downstream 916 7257953 ~ 7258175 (+)
G434698 NA non-coding downstream 13664 7270701 ~ 7271001 (+)
G434723 NA non-coding downstream 37377 7294414 ~ 7294618 (+)
G434916 NA non-coding downstream 224874 7481911 ~ 7482502 (+)
G434545 NA other upstream 136979 7119317 ~ 7119859 (+)
G433724 NA other upstream 1127060 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 1148663 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 1270550 5975822 ~ 5986288 (+)
G432958 NA other upstream 1596669 5658928 ~ 5660169 (+)
CI01000306_09225597_09230504 NA other downstream 1968528 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 2016862 9263589 ~ 9289035 (+)
G435590 NA other downstream 2455812 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 2603176 9860480 ~ 9865724 (+)
G435639 NA other downstream 2622883 9878664 ~ 9884919 (+)

Expression


Co-expression Network