XLOC_012832


Basic Information

Item Value
gene id XLOC_012832
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 26997576 ~ 26998589 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026904
attgataatcctgctgactgaagatgctttattggccctgcattcactgagggtctctgttgtcctgaagaatgaattggacaccacccacagcacacttccagacctttcttgtcttgtatggattaatcagactccagttCGTGATGATCCCAcatccgactactcactgtccttcacttacttcccggagcaccagagcacctcaccttgaagaagagcaccgtttacaccccattcacgttgtaaataaagcaccctccggggacttgtctgtaaacttatccaactgtgtcgctgttttccctctgcc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026904 True 313 lncRNA 0.48 2 26997576 26998589

Neighbor

gene id symbol gene type direction distance location
XLOC_012831 tspan3a coding upstream 77444 26899316 ~ 26920132 (+)
XLOC_012830 ch25hl1.2 coding upstream 100750 26895994 ~ 26896826 (+)
XLOC_012829 slc28a1 coding upstream 147507 26829086 ~ 26850069 (+)
XLOC_012827 alpk3a coding upstream 242346 26743749 ~ 26755230 (+)
XLOC_012828 AL935332.1 coding upstream 249649 26747811 ~ 26747927 (+)
XLOC_012833 pik3c2a coding downstream 2261 27000850 ~ 27085828 (+)
XLOC_012834 plekha7a coding downstream 102507 27101096 ~ 27307129 (+)
XLOC_012835 BX640463.2 coding downstream 197621 27196210 ~ 27196326 (+)
XLOC_012836 cd81b coding downstream 320000 27318589 ~ 27336157 (+)
XLOC_012837 si:dkey-29p10.4 coding downstream 339405 27337994 ~ 27358871 (+)
XLOC_012825 NA non-coding upstream 536149 26456681 ~ 26461427 (+)
XLOC_012816 NA non-coding upstream 1497968 25477794 ~ 25499608 (+)
XLOC_012817 NA non-coding upstream 1500965 25492411 ~ 25496611 (+)
XLOC_012812 AL935295.1 non-coding upstream 2256855 24737234 ~ 24740721 (+)
XLOC_012841 BX649600.1 non-coding downstream 738135 27736724 ~ 27736840 (+)
XLOC_012845 CR769777.2 non-coding downstream 1305302 28303891 ~ 28304317 (+)
XLOC_012849 CT025546.2 non-coding downstream 2176504 29175093 ~ 29175208 (+)
XLOC_012854 NA non-coding downstream 3131182 30129771 ~ 30131831 (+)

Expression


Co-expression Network