G436495


Basic Information

Item Value
gene id G436495
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9286160 ~ 9288190 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU501037
TCTTTGTCATAAAGCTTTAATGTATTTTTAGCTTTGGCACTTTGCACAGCAGAATTATCTCTTCTCAGACTCAAACAGCGTTATGATGAATTCAGTATTTGTTCCACTTCCTCTGTATGAGCTCGTCGAGATTGAGTGAGTCAGGTTTCTCAATGTCTAAATGTAAGCATCAAAAATGCTGTTCTTGGACTAGTGAGGAAGTTTTGAACTGTGAATCAACAGTGTGTTTTCATAGTAGGTTTAGTACTAGTATTAGTAGATTTGAATCATCATATGACCACTTTAATGAAAGAAACATTTTATCACCTGAGGGCTGGTACATTGAATTATCAGACATAACGAAAGAGTAAGTTGCTGTGGGATCTGGTGTGTTGTCCTGATGGGAATCTGGGTGTTCGAGGCCCACAGATATGGGCTGAGATGTGGCCGGTACAGAAGTGATCAGAGAATATGTCTCTGCAGGTCCAGAACTCTAAAAAACACAGAAGAATTAAGGTCATGTCCATTTCAGCCATTCTTACTCGTTATGGTATTATAAATATATATTTATTACTTTGTGATTGAAAAGATTAATTACAAAGATACTCACCATACCAATTTCTTGACTGGGCACATCTGATCTTATTGATCTCATTTTATTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU501037 True 642 lncRNA 0.37 2 9286160 9288190

Neighbor

gene id symbol gene type direction distance location
CI01000306_09067901_09077320 USP48 coding downstream 208147 9067235 ~ 9078013 (-)
CI01000306_09054500_09064951 NA coding downstream 221209 9054169 ~ 9064951 (-)
CI01000306_09017460_09019520 PSMA5 coding downstream 266291 9017002 ~ 9019869 (-)
CI01000306_09013366_09014513 PSMA5 coding downstream 271647 9013071 ~ 9014513 (-)
CI01000306_08986353_09011689 SORT1A coding downstream 274035 8985405 ~ 9012125 (-)
CI01000306_09290422_09292579 NA coding upstream 1914 9290104 ~ 9292819 (-)
CI01000306_09309973_09348444 CACNA2D3 coding upstream 21783 9309973 ~ 9348444 (-)
CI01000306_09374084_09380300 NA coding upstream 85097 9373287 ~ 9380506 (-)
CI01000306_09381571_09461159 CACNA1DA, CACNA1D coding upstream 92997 9381187 ~ 9461573 (-)
CI01000306_09522093_09523814 NINJ1 coding upstream 233843 9522033 ~ 9525553 (-)
G436555 NA non-coding downstream 25587 9255446 ~ 9260573 (-)
G436426 NA non-coding downstream 35151 9204059 ~ 9251009 (-)
G436415 NA non-coding downstream 165169 9120627 ~ 9120991 (-)
G436413 NA non-coding downstream 169098 9116774 ~ 9117062 (-)
G436311 NA non-coding downstream 183039 9098472 ~ 9103121 (-)
G436469 NA non-coding upstream 44783 9332973 ~ 9396739 (-)
G436476 NA non-coding upstream 217458 9505648 ~ 9562605 (-)
G436451 NA non-coding upstream 259519 9547709 ~ 9549810 (-)
G436603 NA non-coding upstream 288058 9576248 ~ 9577239 (-)
G436458 NA non-coding upstream 295416 9583606 ~ 9585632 (-)
G434338 NA other downstream 2419224 6866656 ~ 6866936 (-)
G434086 NA other downstream 2833909 6437406 ~ 6452251 (-)
G434016 NA other downstream 2924517 6355180 ~ 6361643 (-)
G433985 NA other downstream 3088950 6196107 ~ 6197210 (-)
G433670 NA other downstream 3244877 6041014 ~ 6041283 (-)
G436446 NA other upstream 368089 9656279 ~ 9671776 (-)
G436626 NA other upstream 546835 9835025 ~ 9836323 (-)
G436643 NA other upstream 733958 10022148 ~ 10025375 (-)

Expression


Co-expression Network