Item | Value |
---|---|
gene id | G436669 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000306 |
NCBI id | null |
chromosome length | 11491657 |
location | 9903196 ~ 9903649 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU501224 | True | 454 | lncRNA | 0.40 | 1 | 9903196 | 9903649 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000306_09887420_09890429 | YOD1 | coding | downstream | 12767 | 9887140 ~ 9890429 (-) |
CI01000306_09879930_09884435 | NA | coding | downstream | 17926 | 9878694 ~ 9885270 (-) |
CI01000306_09825468_09827244 | NA | coding | downstream | 75914 | 9824575 ~ 9827282 (-) |
CI01000306_09801952_09806496 | BSNB | coding | downstream | 94396 | 9801947 ~ 9808800 (-) |
CI01000306_09753380_09774568 | NA | coding | downstream | 128412 | 9752368 ~ 9774784 (-) |
CI01000306_09944940_09958459 | ETNK2 | coding | upstream | 40982 | 9944631 ~ 9959168 (-) |
CI01000306_09983479_10008765 | SLC41A1 | coding | upstream | 78944 | 9982593 ~ 10009753 (-) |
CI01000306_10025743_10034143 | KLHDC8A | coding | upstream | 122044 | 10025693 ~ 10034143 (-) |
CI01000306_10262423_10269446 | ELK4 | coding | upstream | 358774 | 10262423 ~ 10269446 (-) |
CI01000306_10274565_10279388 | NA | coding | upstream | 370216 | 10273865 ~ 10279388 (-) |
G436667 | NA | non-coding | downstream | 6934 | 9896024 ~ 9896262 (-) |
G436666 | NA | non-coding | downstream | 7178 | 9895783 ~ 9896018 (-) |
G436665 | NA | non-coding | downstream | 7454 | 9895518 ~ 9895742 (-) |
G436664 | NA | non-coding | downstream | 7913 | 9895042 ~ 9895283 (-) |
G436639 | NA | non-coding | downstream | 9988 | 9892180 ~ 9893208 (-) |
G436668 | NA | non-coding | upstream | 297 | 9903946 ~ 9904572 (-) |
G436674 | NA | non-coding | upstream | 60415 | 9964064 ~ 9964559 (-) |
G436680 | NA | non-coding | upstream | 109786 | 10013435 ~ 10013659 (-) |
G436642 | NA | non-coding | upstream | 174334 | 10077983 ~ 10109617 (-) |
G436716 | NA | non-coding | upstream | 231387 | 10135036 ~ 10135369 (-) |
G436626 | NA | other | downstream | 66873 | 9835025 ~ 9836323 (-) |
G436446 | NA | other | downstream | 231420 | 9656279 ~ 9671776 (-) |
G434338 | NA | other | downstream | 3036260 | 6866656 ~ 6866936 (-) |
G434086 | NA | other | downstream | 3450945 | 6437406 ~ 6452251 (-) |
G434016 | NA | other | downstream | 3541553 | 6355180 ~ 6361643 (-) |
G436643 | NA | other | upstream | 118499 | 10022148 ~ 10025375 (-) |