G435663


Basic Information

Item Value
gene id G435663
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9903949 ~ 9904587 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU500102
TTAATAGGCGAGTTGGGGGGTAAAACAGCACAGCAAAGCACAAGCAAACAGGAAGGCAGAAAACAGGCATATCCGCTCCCAAAGTTCTTTTTATAATGTGAGACATTTTTGCAACCACAATGTGAGATTATTCTTATTAGTCACAATGATTGCCTAATTGGCATAGTGTGTAGCGCGGAGAATACAGAGTGATTCTTGCAGGCCTGACAGGCAGGCTGTGTTATAATGAAGACAAGGGGTCTAAAGAACGTTTGGTTGTGTTCCAAAAGACTGAATTAACGTCTTCATTCTATGGAGTCATTTGCATTTGTAAATGCCACGGTTCTGCAGAAATGCTTGCAAGATGTAGAGTGTTTGGGTTCACCAGTCTTTTGATGCACAAAAGGCCTGTCCTGACATTGGGAGCTCATAGGGTACGTTCCAACAACGGCCAGAAACATACTCTGTGCAAGCACACAAGTAAACCATTCATAGGTTGATTCCTTCAAAAAGCATAAATGCTGAAACATTGCTGTGTTTGTTTGAGCATCCCAGTCTGTATGGGAAACTTCACTTTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATCAATTACATGTCATTCCAAACCCGTAAGACTTTCGTTCATCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU500102 True 639 lncRNA 0.41 1 9903949 9904587

Neighbor

gene id symbol gene type direction distance location
CI01000306_09891658_09893015 SNRPE coding upstream 10793 9891532 ~ 9893239 (+)
CI01000306_09866302_09875270 KIF17 coding upstream 28232 9866302 ~ 9875717 (+)
CI01000306_09860935_09865155 SH2D5 coding upstream 38695 9860480 ~ 9865724 (+)
CI01000306_09851578_09857742 HP1BP3 coding upstream 45397 9851227 ~ 9858552 (+)
CI01000306_09674684_09680504 CRELD1 coding upstream 223276 9672775 ~ 9680673 (+)
CI01000306_09922070_09935786 SOX13 coding downstream 17483 9922070 ~ 9936407 (+)
CI01000306_09971328_09977478 NA coding downstream 66741 9971328 ~ 9977752 (+)
CI01000306_10078014_10104625 NA coding downstream 172969 10077556 ~ 10105147 (+)
CI01000306_10109047_10115899 NA coding downstream 203048 10107635 ~ 10116072 (+)
CI01000306_10190981_10191175 NA coding downstream 286394 10190981 ~ 10191195 (+)
G435661 NA non-coding upstream 5726 9897860 ~ 9898223 (+)
G435660 NA non-coding upstream 6555 9896994 ~ 9897394 (+)
G435639 NA non-coding upstream 19030 9878664 ~ 9884919 (+)
G435637 NA non-coding upstream 26068 9877640 ~ 9877881 (+)
G435664 NA non-coding downstream 271 9904858 ~ 9905113 (+)
G435678 NA non-coding downstream 108948 10013535 ~ 10013776 (+)
G435681 NA non-coding downstream 117741 10022328 ~ 10025387 (+)
G435701 NA non-coding downstream 148290 10052877 ~ 10053204 (+)
G435702 NA non-coding downstream 149127 10053714 ~ 10130880 (+)
G435590 NA other upstream 166805 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 618620 9263589 ~ 9289035 (+)
G436932 NA other downstream 1178401 11082988 ~ 11098376 (+)
G437030 NA other downstream 1365171 11269758 ~ 11271160 (+)

Expression


Co-expression Network