G435678


Basic Information

Item Value
gene id G435678
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10013535 ~ 10013776 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU500117
TGAATGTATCCAAACAGTTGCTCACCTGTCTAATAAAAACATATAACATATTAAAGCATCTTTGGTGTTTCCATGGTTTCTACAAAATAAAACTGGAAACCAAGGGTAGCGCAGGTATGATGTCATTGATAGGCGACACATGAACACGGTCCGTGTCCTAGTTAAAATAGCTTATTTCTCTGGATTTAAACATTCTTGGAAGCATTTGGGATATTGTAAGTATACAAGTCAACTATATATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU500117 True 242 lncRNA 0.35 1 10013535 10013776

Neighbor

gene id symbol gene type direction distance location
CI01000306_09971328_09977478 NA coding upstream 35783 9971328 ~ 9977752 (+)
CI01000306_09922070_09935786 SOX13 coding upstream 77128 9922070 ~ 9936407 (+)
CI01000306_09891658_09893015 SNRPE coding upstream 120379 9891532 ~ 9893239 (+)
CI01000306_09866302_09875270 KIF17 coding upstream 137818 9866302 ~ 9875717 (+)
CI01000306_09860935_09865155 SH2D5 coding upstream 148281 9860480 ~ 9865724 (+)
CI01000306_10078014_10104625 NA coding downstream 63780 10077556 ~ 10105147 (+)
CI01000306_10109047_10115899 NA coding downstream 93859 10107635 ~ 10116072 (+)
CI01000306_10190981_10191175 NA coding downstream 177205 10190981 ~ 10191195 (+)
CI01000306_10194611_10226157 CDK18 coding downstream 180462 10194238 ~ 10226166 (+)
CI01000306_10241081_10252745 MFSD4A coding downstream 227305 10241081 ~ 10252864 (+)
G435664 NA non-coding upstream 108422 9904858 ~ 9905113 (+)
G435663 NA non-coding upstream 108948 9903949 ~ 9904587 (+)
G435661 NA non-coding upstream 115312 9897860 ~ 9898223 (+)
G435660 NA non-coding upstream 116141 9896994 ~ 9897394 (+)
G435639 NA non-coding upstream 128616 9878664 ~ 9884919 (+)
G435681 NA non-coding downstream 8552 10022328 ~ 10025387 (+)
G435701 NA non-coding downstream 39101 10052877 ~ 10053204 (+)
G435702 NA non-coding downstream 39938 10053714 ~ 10130880 (+)
G435746 NA non-coding downstream 109188 10122964 ~ 10125251 (+)
G435750 NA non-coding downstream 121207 10134983 ~ 10135303 (+)
G435590 NA other upstream 276391 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 728206 9263589 ~ 9289035 (+)
G436932 NA other downstream 1069212 11082988 ~ 11098376 (+)
G437030 NA other downstream 1255982 11269758 ~ 11271160 (+)

Expression


Co-expression Network