G435746


Basic Information

Item Value
gene id G435746
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10122964 ~ 10125251 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU500192
CCCTCCCTCTCATAACCTCTCTTTCATAGTAGATGGGTACCATCATTTTGAGAACTGAGGTTTACATTCTGCAATGGAAGAACATCAGTCCAGTTTTCATCTTTATGGTCACCGTACATGCCGCCACTGTTCTGTACAGACAGAATTTAGTTGTTTATGAAAATGACAATCACAATATGCAACCAAGCTCACTCACATTCACATAAAGAGAGAATGTTGTGTTTAAAAAAGCAGTTTAACAAAGACAAAAAAAAACCTGTGCCTCTATCGACAGCGGTTCACAAAATTCTCAATGCCTGATTAAAAACATAATCCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU500192 True 317 lncRNA 0.38 2 10122964 10125251

Neighbor

gene id symbol gene type direction distance location
CI01000306_10109047_10115899 NA coding upstream 6892 10107635 ~ 10116072 (+)
CI01000306_10078014_10104625 NA coding upstream 17817 10077556 ~ 10105147 (+)
CI01000306_09971328_09977478 NA coding upstream 145212 9971328 ~ 9977752 (+)
CI01000306_09922070_09935786 SOX13 coding upstream 186557 9922070 ~ 9936407 (+)
CI01000306_09891658_09893015 SNRPE coding upstream 229808 9891532 ~ 9893239 (+)
CI01000306_10190981_10191175 NA coding downstream 65730 10190981 ~ 10191195 (+)
CI01000306_10194611_10226157 CDK18 coding downstream 68987 10194238 ~ 10226166 (+)
CI01000306_10241081_10252745 MFSD4A coding downstream 115830 10241081 ~ 10252864 (+)
CI01000306_10304503_10316470 NA coding downstream 178994 10304245 ~ 10316678 (+)
CI01000306_10332743_10335743 NA coding downstream 207410 10332661 ~ 10335849 (+)
G435701 NA non-coding upstream 69760 10052877 ~ 10053204 (+)
G435681 NA non-coding upstream 97577 10022328 ~ 10025387 (+)
G435678 NA non-coding upstream 109188 10013535 ~ 10013776 (+)
G435664 NA non-coding upstream 217851 9904858 ~ 9905113 (+)
G435663 NA non-coding upstream 218377 9903949 ~ 9904587 (+)
G435750 NA non-coding downstream 9732 10134983 ~ 10135303 (+)
G435753 NA non-coding downstream 13668 10138919 ~ 10139178 (+)
G435764 NA non-coding downstream 131670 10256921 ~ 10261092 (+)
G435767 NA non-coding downstream 158387 10283638 ~ 10286492 (+)
G435878 NA non-coding downstream 387499 10512750 ~ 10527209 (+)
G435639 NA other upstream 238045 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 259775 9860480 ~ 9865724 (+)
G435590 NA other upstream 385820 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 837635 9263589 ~ 9289035 (+)
G436932 NA other downstream 957737 11082988 ~ 11098376 (+)
G437030 NA other downstream 1144507 11269758 ~ 11271160 (+)

Expression


Co-expression Network