XLOC_012841 (BX649600.1)



Basic Information


Item Value
gene id XLOC_012841
gene name BX649600.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27736724 ~ 27736840 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00025621
gccagcagctagctctctgcaattctcacatggtagcccactaaagctaagcagggctgtgtccagtcagtacctggatgggagaccacatgggaaagctactgtaggttgctgcca

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107143

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00025621 True 117 rRNA 0.54 1 27736724 27736840

Neighbor


gene id symbol gene type direction distance location
XLOC_012839 cd82b coding upstream 110333 27571448 ~ 27626391 (+)
XLOC_012838 tp53i11b coding upstream 166694 27439680 ~ 27570030 (+)
XLOC_012837 si:dkey-29p10.4 coding upstream 377853 27337994 ~ 27358871 (+)
XLOC_012836 cd81b coding upstream 400567 27318589 ~ 27336157 (+)
XLOC_012835 BX640463.2 coding upstream 540398 27196210 ~ 27196326 (+)
XLOC_012842 si:ch211-222m18.4 coding downstream 85016 27821856 ~ 27822787 (+)
XLOC_012843 hipk3b coding downstream 167675 27904515 ~ 27993797 (+)
XLOC_012844 kiaa1549lb coding downstream 365780 28102620 ~ 28156256 (+)
XLOC_012845 CR769777.2 coding downstream 567051 28303891 ~ 28304317 (+)
XLOC_012846 spon1a coding downstream 827800 28564640 ~ 28880191 (+)
XLOC_012832 NA non-coding upstream 738135 26997576 ~ 26998589 (+)
XLOC_012828 AL935332.1 non-coding upstream 988797 26747811 ~ 26747927 (+)
XLOC_012825 NA non-coding upstream 1275297 26456681 ~ 26461427 (+)
XLOC_012817 NA non-coding upstream 2240113 25492411 ~ 25496611 (+)
XLOC_012849 CT025546.2 non-coding downstream 1438253 29175093 ~ 29175208 (+)
XLOC_012854 NA non-coding downstream 2392931 30129771 ~ 30131831 (+)
XLOC_012863 NA non-coding downstream 3336403 31073243 ~ 31075619 (+)
XLOC_012865 NA non-coding downstream 3544010 31280850 ~ 31459487 (+)
XLOC_012834 plekha7a coding upstream 429595 27101096 ~ 27307129 (+)
XLOC_012816 NA non-coding upstream 2237116 25477794 ~ 25499608 (+)

Expression



Co-expression Network