G435753


Basic Information

Item Value
gene id G435753
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10138919 ~ 10139178 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU500200
CTTAGTAAATACCATTAATAATTTATGTAATTATAGTATTTTGACAAAACTGTGTAAAACAGGTGAAAGTGATTTCACCAAGTACAACATGCTCCTGGATCAACATTCCAATCAACCAATCAGATTTGAGGGGCAAGTTTACAGTTTATGTCAAGTTTAGGCTAACAACCAGGGTTAGGTGCTTCTACATCAGTGTTATTCACCTACCATTCCCTCTGATTTTAGGAATAACTTATGGGTTGGGTTAGGTTTAGGGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU500200 True 260 lncRNA 0.36 1 10138919 10139178

Neighbor

gene id symbol gene type direction distance location
CI01000306_10109047_10115899 NA coding upstream 22847 10107635 ~ 10116072 (+)
CI01000306_10078014_10104625 NA coding upstream 33772 10077556 ~ 10105147 (+)
CI01000306_09971328_09977478 NA coding upstream 161167 9971328 ~ 9977752 (+)
CI01000306_09922070_09935786 SOX13 coding upstream 202512 9922070 ~ 9936407 (+)
CI01000306_09891658_09893015 SNRPE coding upstream 245763 9891532 ~ 9893239 (+)
CI01000306_10190981_10191175 NA coding downstream 51803 10190981 ~ 10191195 (+)
CI01000306_10194611_10226157 CDK18 coding downstream 55060 10194238 ~ 10226166 (+)
CI01000306_10241081_10252745 MFSD4A coding downstream 101903 10241081 ~ 10252864 (+)
CI01000306_10304503_10316470 NA coding downstream 165067 10304245 ~ 10316678 (+)
CI01000306_10332743_10335743 NA coding downstream 193483 10332661 ~ 10335849 (+)
G435750 NA non-coding upstream 3616 10134983 ~ 10135303 (+)
G435702 NA non-coding upstream 8039 10053714 ~ 10130880 (+)
G435746 NA non-coding upstream 13668 10122964 ~ 10125251 (+)
G435701 NA non-coding upstream 85715 10052877 ~ 10053204 (+)
G435681 NA non-coding upstream 113532 10022328 ~ 10025387 (+)
G435764 NA non-coding downstream 117743 10256921 ~ 10261092 (+)
G435767 NA non-coding downstream 144460 10283638 ~ 10286492 (+)
G435878 NA non-coding downstream 373572 10512750 ~ 10527209 (+)
G435889 NA non-coding downstream 467686 10606864 ~ 10607159 (+)
G436913 NA non-coding downstream 538187 10677365 ~ 10677606 (+)
G435639 NA other upstream 254000 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 275730 9860480 ~ 9865724 (+)
G435590 NA other upstream 401775 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 853590 9263589 ~ 9289035 (+)
G436932 NA other downstream 943810 11082988 ~ 11098376 (+)
G437030 NA other downstream 1130580 11269758 ~ 11271160 (+)

Expression


Co-expression Network