G436648



Basic Information


Item Value
gene id G436648
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10253664 ~ 10322166 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU501203
TTAATTTGTGTTCTGAAGATGAACGAAAGTCTTACGGATTTGAAACAACATGAGGGTAAATAAAAGATCATTTTCATTTTTGGTTGAACAAATCCTTTAAAAGCCTATTAGCACATGATTTTCAACCATTGCAAAAATGGAACATTCTTTAAAATTGTCACAAACAGGAAGTGACATTATTTGCCACTTTTATAGAATGACAAAATAGGCAATTACAAAATCTCATTCCACTGTAAATTTGTACACATTGTAGTATTAACCATATTCTTAACCATTTAAAAAAAAAAAAAATTTTTAATTTATATGAAATATGTTTTTAATTGACTACAAACCAACATATGGGCCAAAGAAACTATCCTCTGGTTTTAATCCATATTCAGACATTTTCCACATTCAAAAATAGAAATGCCATATACAATAGAAAATTAAACAACATATTATGTCTTTAATATTTTAATCTTAAATATCCTTCAGAGGTGGACAAACTCTTTTTCTGCAGATTCCTATTTTGTACCCTATTCATAAAAAGTGCCAATGTTAAACTTTAAGACACTGCCCTGTAACAGAATCAAATTTTTTTTTCTTATCCTCTAAATGTTGACATGTCATGACTGCACTGTATTTGGAACAATATTCTGTTTTTCATGGGCAAAATTATGTAGGGGAAAAAAAGGATGATGTAATAATCAAAAGTGTGAAATTTTTACTGTAATGGTACAATATCAACACCAAATGTTTTCAGTATTTTTTTGTGCAAATGTATTTTCAGATTGTCTCTCTCTAGCAGCTCAAATGTTTACAAATTTATGTTCATTGGCGTACATGTTGTACTAATCTGTGGATGTTGGAAGGGAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU501203 True 856 lncRNA 0.29 2 10253664 10322166
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000306_10025743_10034143 KLHDC8A coding downstream 219521 10025693 ~ 10034143 (-)
CI01000306_09983479_10008765 SLC41A1 coding downstream 243911 9982593 ~ 10009753 (-)
CI01000306_09944940_09958459 ETNK2 coding downstream 294496 9944631 ~ 9959168 (-)
CI01000306_09887420_09890429 YOD1 coding downstream 363235 9887140 ~ 9890429 (-)
CI01000306_09879930_09884435 NA coding downstream 368394 9878694 ~ 9885270 (-)
CI01000306_10359441_10361943 NA coding upstream 36570 10358736 ~ 10362160 (-)
CI01000306_10517455_10523487 CLDN19.S, CLDN19 coding upstream 195274 10517440 ~ 10523654 (-)
CI01000306_10536444_10545622 NA coding upstream 213970 10536136 ~ 10545622 (-)
CI01000306_10551500_10554962 AP5B1 coding upstream 229220 10551386 ~ 10555181 (-)
CI01000306_10589795_10591581 WNT4.S, WNT4, WNT4A2, WNT4A, WNT4A1 coding upstream 267504 10589670 ~ 10591581 (-)
G436716 NA non-coding downstream 118295 10135036 ~ 10135369 (-)
G436642 NA non-coding downstream 144047 10077983 ~ 10109617 (-)
G436680 NA non-coding downstream 240005 10013435 ~ 10013659 (-)
G436674 NA non-coding downstream 289105 9964064 ~ 9964559 (-)
G436668 NA non-coding downstream 349092 9903946 ~ 9904572 (-)
G436830 NA non-coding upstream 127951 10450117 ~ 10477553 (-)
G436833 NA non-coding upstream 138954 10461120 ~ 10463301 (-)
G436849 NA non-coding upstream 158276 10480442 ~ 10480671 (-)
G436850 NA non-coding upstream 159593 10481759 ~ 10482192 (-)
G436852 NA non-coding upstream 164473 10486639 ~ 10486868 (-)
G436643 NA other downstream 228289 10022148 ~ 10025375 (-)
G436626 NA other downstream 417341 9835025 ~ 9836323 (-)
G436446 NA other downstream 581888 9656279 ~ 9671776 (-)
G434338 NA other downstream 3386728 6866656 ~ 6866936 (-)
G434086 NA other downstream 3801413 6437406 ~ 6452251 (-)

Expression


G436648 Expression in PRJCA010000

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G436648 Expression in each Bioproject

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G436648 Expression in each Sample
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Co-expression Network