XLOC_012842 (si:ch211-222m18.4)


Basic Information

Item Value
gene id XLOC_012842
gene name si:ch211-222m18.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27821856 ~ 27822787 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025623
CCTGCACTCAACTCAACATTGATGCTGCACCTGATTGTGAATCCTACGAGAAACTTGATGCAGAACGGCCGGCCATCTTGAAAGCGACAGATAACCTTAAGAAACCATTCCAGTTTTTGGAGCCCTTCGCTGGACAACAGACTACACAGCAGTTACAAAACACATTACATTGATCACATTTGCTCATTTTCTGATAGCTTTTTTCTTTAGTTTCCATTTTgacaaaattagcttaaaggaatagttcacccaaaaataaaaaatacctgaataaattaatgtactcaccctcaagtcaCCCACaggctgattttcatttttgggtaaattattcTTTTAGCTTGTTCATGACAGTCGAGTTAACACATTTGCATGatatgcacaataaaataaaagcaaattactCTATTCATTTGAATTGAGGTCACAATAGTCAATATTTTGCACAATAATTCATTTCTGTTTCTTTTAGGTGGGATTTCATTCCATCAGATAGACATCTACATCCTGGTGGGGAAAGTGGACAGACTTACAGGAAGGATTTCAGAAGAACtgcatttattagaaataaaaatttaagacattttaaatgac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094425

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025623 True 594 mRNA 0.35 2 27821856 27822787

Neighbor

gene id symbol gene type direction distance location
XLOC_012840 tspan18b coding upstream 8692 27732285 ~ 27813164 (+)
XLOC_012841 BX649600.1 coding upstream 85016 27736724 ~ 27736840 (+)
XLOC_012839 cd82b coding upstream 195465 27571448 ~ 27626391 (+)
XLOC_012838 tp53i11b coding upstream 251826 27439680 ~ 27570030 (+)
XLOC_012837 si:dkey-29p10.4 coding upstream 462985 27337994 ~ 27358871 (+)
XLOC_012843 hipk3b coding downstream 81728 27904515 ~ 27993797 (+)
XLOC_012844 kiaa1549lb coding downstream 279833 28102620 ~ 28156256 (+)
XLOC_012845 CR769777.2 coding downstream 481104 28303891 ~ 28304317 (+)
XLOC_012846 spon1a coding downstream 741853 28564640 ~ 28880191 (+)
XLOC_012847 syt9a coding downstream 1165586 28988373 ~ 29060842 (+)
XLOC_012835 BX640463.2 non-coding upstream 625530 27196210 ~ 27196326 (+)
XLOC_012832 NA non-coding upstream 823267 26997576 ~ 26998589 (+)
XLOC_012828 AL935332.1 non-coding upstream 1073929 26747811 ~ 26747927 (+)
XLOC_012825 NA non-coding upstream 1360429 26456681 ~ 26461427 (+)
XLOC_012849 CT025546.2 non-coding downstream 1352306 29175093 ~ 29175208 (+)
XLOC_012854 NA non-coding downstream 2306984 30129771 ~ 30131831 (+)
XLOC_012863 NA non-coding downstream 3250456 31073243 ~ 31075619 (+)
XLOC_012865 NA non-coding downstream 3458063 31280850 ~ 31459487 (+)

Expression


Co-expression Network