XLOC_012843 (hipk3b)


Basic Information

Item Value
gene id XLOC_012843
gene name hipk3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27904515 ~ 27993797 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025624
GAgagtgagtgagcgagcgagTGAGTGCAGAGGGACATGACATCGACTGTCAGAGCTGCTCTTCCCCGCACACAACATGGGCTCCACCGCCCATACCACCAAAACCAGAGCTCAAGCATCAACGCAATGTCCCGGACTCGGTTCTGTGTCGTGAATAGCGCGTATTGTTAGGCTATTTGAGGTGTAAAGATGTGGGTGATGGTGCTGTGGACTCAGGACAAGATGGCAGCAGTATGAGAAACACACATCAACATGCTGTGAGTTCAGTTGAAGTGTGTAAAATGATCGGAGAAGACCTGGATTATATCTACTGTTACTCCGTGTGAAAGGTATGGCCTCACAAGTCTTGGTCTACCCACCACATGTTTTTCAAACTCAGACAAGTGCCTTTTGCAGTGTGAAGAAACTCAAAGTTGAGCCCAGGAACTGTGTTTACCATGAGAGGGCCTACCCACAGACTTACTTGAATGGTAGAACCCTTGGCATTGCTTACCCGACAAAACTTACTGCTTCATTCAAGACAAGAGATTCAGTAATTGGCATACACCGCGGGCAGGATTTCCCACTGCAGACGGCTGCTGTACAAGGTGTGCGACGTCAACACACCATCACAGTGGCACAGCAGCAAAAAAGAGGCGCCTCTTCTCAGGAAAAGGAGTCTGAGCACCAGGACAAAGGAAGGGTTTGCAGCAGTGGAGCTACAAGGGCAGCTGGAAGGGGAAGGGGAGTGGGAAGCGACAGTCAAGAAGAAGGAGGTGGAGGACAGGGTGGAGTTGACGAAGGAGGTGGAGGAGAGGACGAGGGTGACCAGGAAGACTGTGGAGGTTTTGACTTGAATGACAGCTCCCACAGATGTGGGCTGAAACGTAAGAGCGGGGAGCTTGAGAACTTGGGGAGCACCATGCAGATTGTTGAGGACCTGTCAATGTTACCCGCAATGTTGCAATCAAATGTGGGAAATCCACCTGTTGCGGTTCCACAGGCAGTTGGCGGAGGGCCTGCAAAGCAAGGTGGAGGTTCAGGAAATGGGGATGGAGATTACCAGTTGGTGCAGCATGAGATGCTTTGCTCGTTGAAGAACACCTATGAGGTATTAGACTTCCTTGGTCGTGGTACTTTCGGCCAGGTTGTAAAATGCTGGAAACGAGGCACCAAAGACATTGTGGCAGTGAAGATCCTGAAGAATCATCCATCATATGCACGGCAGGGGCAGATTGAGGTGGGCATCCTGGCCCGCCTGAGCAATGAGAATGCCGATGAGCATAATTTAGTGCGGGCTTTTGAGTGTTTCCAGCACCGGAGCCACACCTGCCTCGTGTTTGAGATGCTGGAGCAGAACTTGTATGACTTCCTCAAGCAAAATAAATTCAGCCCATTACCTCTGAAGGTGATTCGTCCCATTCTTCAGCAGGTGGCCACGGCACTAAAAAAGTTGAAGGGAATGGGACTGATCCACGCAGACCTGAAGCCTGAGAACATCATGCTGGTGGACCCTGTACGGCAGCCCTACCGTGTGAAAGTCATAGACTTTGGCTCAGCAAGTCACGTGTCCAAAGCAGTCTGCTCAACGTACCTCCAGTCACGGTACTACAGGGCTCCAGAGATCATTCTTGGCCTGCCTTTTTGTGAAGCCATAGACATGTGGTCGCTGGGATGTGTAATTGCTGAGCTCTTCTTGGGTTGGCCCCTATATCCAGGAGCCCTCGAGTTTGACCAGATTCGCTACATTTCTCAGACGCAGGGTCTGCCAGGAGAGCATCTGTTAAATGTGGGGACGAAGACGTCTCGATTCTTTTGCCGGGAGTCGGACTCGCCGTATGCGACCTGGAGACTTAAATCCACAGAGGAGCATGAGACAGAGACGGGGCTGAAATCAAAAGAAGCCAGGAAGTACATCTTCAGCTGTTTGGATGACATAGCGCATGTGAATCTAGTGATGAATCTGGAAGGCTGTGATTTGTTGGCAGAGAAGGTTGATCGTGCAGAGTTTGTGGCTTTGCTGAAGAAGATGTTGTTAATAGATGCAGAGGAAAGAATCGCCCCGAGTGATGCTCTTAGCCATCCTTTCGTTACCATGCAGCACCTGCTAGACTTTCCACACAGCAACCATGTCAAATCATGTtttcacatcatggatgtttGCTGCTCACGACCAGGCAGTTATGAGTCTCACAGTCGGACCAAGGCTCAGTTTGTCAGGACAGTCCCGAGCACTGGTGCTGCATCCAACCTCACCCTGCCCTTCTGCAAGGTGACTGGCATTCACACTCAGGCTTTAGCCTCATCTGCCCCGACAGTGATGCATCCTGGAATacctcttcagacaggaagtgctCAGTTTGGAGACTCTTTCCAGCAGGCGCTAATTCTCTGTCCCCCAACAATACAAGGTCTCCCACCAAACCCAAATAAACCAGCAGGATACTCAGTAAGCATGGAGAGCACAGTCCCGCTGGTGACACAAGCATCTGCCATTCAGCCTCTACAGATCAGACCAGGGGTCATCACACAGcaAGGGTGGTCAAATCGTGCCCAGCAGATCCTGGTGCCCACCTGGCCTCAGGTGACCCCAGTAGCCCCTGTGGCTCCCTCAGCAACAACATTGGCCTCAGAACCAGTGGCAGGCCCACAGAGACTAGCAGATTGGGGGAAAGTTCATTCCCATGGCAACCATTACAGCTCCATGATGCCGCACCATCAGCCACTGTTAACCAACCCGATGGCCATGTCAGCTCATCAGCCTATCAGTATAGGGATAGCCCATGTAGTCTGGCCACAGCCAGCGGCTAACAAGAGAAACAAACCTTCTTCAAACAGATGTAACAACTTCATGCACAGCACCAACTCCCAAAACGTATCATGCCAGTCCCCAAAGATGGTAAACAGTGCCAAAAACACAGAGGAAGAGGCAGCTGATTGTGTGGTGGAGGCAGAGTCAGAGGCGGTGCAAGAGGAGGAGTCTGTGTGCTGTAAGGCGGAACCAGAGTATGAGGACCCGACTGTGTCTCAGAAACAGAGGCAGACCATCGTTATCACTGATTCTCCAAGCCCTGCAGGCAGCATCATCAGTATCAGCAGTGGAACAGATGAAGATGGGCCGGACACTCAAAAACATGCACTAGAGTGTAAGGGTAGCCCAGACTGTGAGGCATGTCAGAGCACACTGAATATGGAGCGTGTTTGTTCCCTGAGCAGTCCTGATTCAACACTCAGCACCAGTTCATCAGCTTCAGAACAGTCCAGCGCCTCCCCCTGCAAGAGACCCAACAGTATGTCAGATGATGAGCGTGAGAGTGGGTGTGATACGGTGGACGGCTCGCCTGCATCGGTGTCCTCCAGTCGAGCTGACAGTCCCTTCCTGGAGGCTACCTATATTAATGACAACAACCAGAACTGCAAAGCTACTGGAAGTACAGAGACAGAGTCTGCCAAGCTGCCTGTCCGCACCATGGTGGTGCCACCAATGCGGGTTCAGAATGAGCCAGTGGGGCGAACAGTAATAGAACCATCATGTCCACCCAAAGGGCGCAGTGGTTCCAACAGACAGCTGCCCTACTCAACATTATTGGTGAATCGACAACAGAAGTCCACACCGGCTTTCCCGCCCCTGCAGCCCCCTCAACAGCAGCTTTTTGGACAGGTCCAGCATTATGGCTCATCCCACCAGGAGTGGAATGGGAACTACAGTCACCGGCGACCCCAGGCGTTCATCCCACCCACCGTACACAGCCACACTTTCACTCTGCCTCATGGTAGTCCCACTCACACAACTCACCCCCCTCAATCGCACCTGGGCGTCCACCCTCACACCCAGCCAGCTTTACTGTCCTACCCCCCGTCAGGCCCCCTGGTGACAAATGCCCCCATGGCCCACCTCTTGGCATCACCTGGGGCTACACGAAATCATGTTTTTCAGCCAGCGTATGGCCTCTCTCATCCTGCGGGTCACCTTTTGCACCAGGTCACTGTGGGGATCAATCGTCTCCTACCCTCACCCACCATCCACCCTCAAGGTCAATTCAAACCCTTGTTCCCCCCTCACTCCTTCATTGCATCACCCGCATATGCAGGCTTTCCCCTAAGCCCCACCAAACTAAACCAATACCCATATGTCTGAGACTCGCTTCACAAGCCTCTGGAGGGCCGTCAACATGGACGAAATGCCGTGCTCTCTGCAGAAACCACCAACCACCTGGTTTTCAGACCATGGCTAAGAAAGAAAAGCGGTTTCTCTGGATTATGTAGACTTGAGTGCAATTAATATGAGctttaaaaaggaaatgttgGGAAAGTTTTTTGCAAGTAGACAAAGAAAGTGCACGGTTGAGAATCAAGCgaattggataaaaaaaaaaaaa
>TCONS_00025625
ATGGCCTCACAAGTCTTGGTCTACCCACCACATGTTTTTCAAACTCAGACAAGTGCCTTTTGCAGTGTGAAGAAACTCAAAGTTGAGCCCAGGAACTGTGTTTACCATGAGAGGGCCTACCCACAGACTTACTTGAATGGTAGAACCCTTGGCATTGCTTACCCGACAAAACTTACTGCTTCATTCAAGACAAGAGATTCAGTAATTGGCATACACCGCGGGCAGGATTTCCCACTGCAGACGGCTGCTGTACAAGGTGTGCGACGTCAACACACCATCACAGTGGCACAGCAGCAAAAAAGAGGCGCCTCTTCTCAGGAAAAGGAGTCTGAGCACCAGGACAAAGGAAGGGTTTGCAGCAGTGGAGCTACAAGGGCAGCTGGAAGGGGAAGGGGAGTGGGAAGCGACAGTCAAGAAGAAGGAGGTGGAGGACAGGGTGGAGTTGACGAAGGAGGTGGAGGAGAGGACGAGGGTGACCAGGAAGACTGTGGAGGTTTTGACTTGAATGACAGCTCCCACAGATGTGGGCTGAAACGTAAGAGCGGGGAGCTTGAGAACTTGGGGAGCACCATGCAGATTGTTGAGGACCTGTCAATGTTACCCGCAATGTTGCAATCAAATGTGGGAAATCCACCTGTTGCGGTTCCACAGGCAGTTGGCGGAGGGCCTGCAAAGCAAGGTGGAGGTTCAGGAAATGGGGATGGAGATTACCAGTTGGTGCAGCATGAGATGCTTTGCTCGTTGAAGAACACCTATGAGGTATTAGACTTCCTTGGTCGTGGTACTTTCGGCCAGGTTGTAAAATGCTGGAAACGAGGCACCAAAGACATTGTGGCAGTGAAGATCCTGAAGAATCATCCATCATATGCACGGCAGGGGCAGATTGAGGTGGGCATCCTGGCCCGCCTGAGCAATGAGAATGCCGATGAGCATAATTTAGTGCGGGCTTTTGAGTGTTTCCAGCACCGGAGCCACACCTGCCTCGTGTTTGAGATGCTGGAGCAGAACTTGTATGACTTCCTCAAGCAAAATAAATTCAGCCCATTACCTCTGAAGGTGATTCGTCCCATTCTTCAGCAGGTGGCCACGGCACTAAAAAAGTTGAAGGGAATGGGACTGATCCACGCAGACCTGAAGCCTGAGAACATCATGCTGGTGGACCCTGTACGGCAGCCCTACCGTGTGAAAGTCATAGACTTTGGCTCAGCAAGTCACGTGTCCAAAGCAGTCTGCTCAACGTACCTCCAGTCACGGTACTACAGGGCTCCAGAGATCATTCTTGGCCTGCCTTTTTGTGAAGCCATAGACATGTGGTCGCTGGGATGTGTAATTGCTGAGCTCTTCTTGGGTTGGCCCCTATATCCAGGAGCCCTCGAGTTTGACCAGATTCGCTACATTTCTCAGACGCAGGGTCTGCCAGGAGAGCATCTGTTAAATGTGGGGACGAAGACGTCTCGATTCTTTTGCCGGGAGTCGGACTCGCCGTATGCGACCTGGAGACTTAAATCCACAGAGGAGCATGAGACAGAGACGGGGCTGAAATCAAAAGAAGCCAGGAAGTACATCTTCAGCTGTTTGGATGACATAGCGCATGTGAATCTAGTGATGAATCTGGAAGGCTGTGATTTGTTGGCAGAGAAGGTTGATCGTGCAGAGTTTGTGGCTTTGCTGAAGAAGATGTTGTTAATAGATGCAGAGGAAAGAATCGCCCCGAGTGATGCTCTTAGCCATCCTTTCGTTACCATGCAGCACCTGCTAGACTTTCCACACAGCAACCATGTCAAATCATGTtttcacatcatggatgtttGCTGCTCACGACCAGGCAGTTATGAGTCTCACAGTCGGACCAAGGCTCAGTTTGTCAGGACAGTCCCGAGCACTGGTGCTGCATCCAACCTCACCCTGCCCTTCTGCAAGGTGACTGGCATTCACACTCAGGCTTTAGCCTCATCTGCCCCGACAGTGATGCATCCTGGAATacctcttcagacaggaagtgctCAGTTTGGAGACTCTTTCCAGCAGGCGCTAATTCTCTGTCCCCCAACAATACAAGGTCTCCCACCAAACCCAAATAAACCAGCAGGATACTCAGTAAGCATGGAGAGCACAGTCCCGCTGGTGACACAAGCATCTGCCATTCAGCCTCTACAGATCAGACCAGGGGTCATCACACAGcaAGGGTGGTCAAATCGTGCCCAGCAGATCCTGGTGCCCACCTGGCCTCAGGTGACCCCAGTAGCCCCTGTGGCTCCCTCAGCAACAACATTGGCCTCAGAACCAGTGGCAGGCCCACAGAGACTAGCAGATTGGGGGAAAGTTCATTCCCATGGCAACCATTACAGCTCCATGATGCCGCACCATCAGCCACTGTTAACCAACCCGATGGCCATGTCAGCTCATCAGCCTATCAGTATAGGGATAGCCCATGTAGTCTGGCCACAGCCAGCGGCTAACAAGAGAAACAAACCTTCTTCAAACAGATGTAACAACTTCATGCACAGCACCAACTCCCAAAACGTATCATGCCAGTCCCCAAAGATGGTAAACAGTGCCAAAAACACAGAGGAAGAGGCAGCTGATTGTGTGGTGGAGGCAGAGTCAGAGGCGGTGCAAGAGGAGGAGTCTGTGTGCTGTAAGGCGGAACCAGAGTATGAGGACCCGACTGTGTCTCAGAAACAGAGGCAGACCATCGTTATCACTGATTCTCCAAGCCCTGCAGGCAGCATCATCAGTATCAGCAGTGGAACAGATGAAGATGGGCCGGACACTCAAAAACATGCACTAGAGTGTAAGGGTAGCCCAGACTGTGAGGCATGTCAGAGCACACTGAATATGGAGCGTGTTTGTTCCCTGAGCAGTCCTGATTCAACACTCAGCACCAGTTCATCAGCTTCAGAACAGTCCAGCGCCTCCCCCTGCAAGAGACCCAACAGTATGTCAGATGATGAGCGTGAGAGTGGGTGTGATACGGTGGACGGCTCGCCTGCATCGGTGTCCTCCAGTCGAGCTGACAGTCCCTTCCTGGAGGCTACCTATATTAATGACAACAACCAGAACTGCAAAGCTACTGGAAGTACAGAGACAGAGTCTGCCAAGCTGCCTGTCCGCACCATGGTGGTGCCACCAATGCGGGTTCAGAATGAGCCAGTGGGGCGAACAGTAATAGAACCATCATGTCCACCCAAAGGGCGCAGTGGTTCCAACAGACAGCTGCCCTACTCAACATTATTGGTGAATCGACAACAGAAGTCCACACCGGCTTTCCCGCCCCTGCAGCCCCCTCAACAGCAGCTTTTTGGACAGGTCCAGCATTATGGCTCATCCCACCAGGAGTGGAATGGGAACTACAGTCACCGGCGACCCCAGGCGTTCATCCCACCCACCGTACACAGCCACACTTTCACTCTGCCTCATGGTAGTCCCACTCACACAACTCACCCCCCTCAATCGCACCTGGGCGTCCACCCTCACACCCAGCCAGCTTTACTGTCCTACCCCCCGTCAGGCCCCCTGGTGACAAATGCCCCCATGGCCCACCTCTTGGCATCACCTGGGGCTACACGAAATCATGTTTTTCAGCCAGCGTATGGCCTCTCTCATCCTGCGGGTCACCTTTTGCACCAGGTCACTGTGGGGATCAATCGTCTCCTACCCTCACCCACCATCCACCCTCAAGGTCAATTCAAACCCTTGTTCCCCCCTCACTCCTTCATTGCATCACCCGCATATGCAGGCTTTCCCCTAAGCCCCACCAAACTAAACCAATACCCATATGTCTGA

Function

symbol description
hipk3b Predicted to enable protein serine/threonine kinase activity and protein tyrosine kinase activity. Predicted to be involved in peptidyl-serine phosphorylation and peptidyl-threonine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in PML body and cytoplasm. Orthologous to human HIPK3 (homeodomain interacting protein kinase 3).

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process
GO:0018107 peptidyl-threonine phosphorylation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0016605 PML body cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-82 Predicted to enable protein serine/threonine kinase activity and protein tyrosine kinase activity. Predicted to be involved in peptidyl-serine phosphorylation and peptidyl-threonine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in PML body and cytoplasm. Orthologous to human HIPK3 (homeodomain interacting protein kinase 3).

Ensembl:

ensembl_id ENSDARG00000062082

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025624 False 4358 mRNA 0.52 16 27904515 27993797
TCONS_00025625 True 3786 mRNA 0.52 15 27926839 27993556

Neighbor

gene id symbol gene type direction distance location
XLOC_012842 si:ch211-222m18.4 coding upstream 81728 27821856 ~ 27822787 (+)
XLOC_012840 tspan18b coding upstream 91351 27732285 ~ 27813164 (+)
XLOC_012841 BX649600.1 coding upstream 167675 27736724 ~ 27736840 (+)
XLOC_012839 cd82b coding upstream 278124 27571448 ~ 27626391 (+)
XLOC_012838 tp53i11b coding upstream 334485 27439680 ~ 27570030 (+)
XLOC_012844 kiaa1549lb coding downstream 108823 28102620 ~ 28156256 (+)
XLOC_012845 CR769777.2 coding downstream 310094 28303891 ~ 28304317 (+)
XLOC_012846 spon1a coding downstream 570843 28564640 ~ 28880191 (+)
XLOC_012847 syt9a coding downstream 994576 28988373 ~ 29060842 (+)
XLOC_012848 ppfibp2a coding downstream 1151884 29145681 ~ 29193708 (+)
XLOC_012835 BX640463.2 non-coding upstream 708189 27196210 ~ 27196326 (+)
XLOC_012832 NA non-coding upstream 905926 26997576 ~ 26998589 (+)
XLOC_012828 AL935332.1 non-coding upstream 1156588 26747811 ~ 26747927 (+)
XLOC_012825 NA non-coding upstream 1443088 26456681 ~ 26461427 (+)
XLOC_012849 CT025546.2 non-coding downstream 1181296 29175093 ~ 29175208 (+)
XLOC_012854 NA non-coding downstream 2135974 30129771 ~ 30131831 (+)
XLOC_012863 NA non-coding downstream 3079446 31073243 ~ 31075619 (+)
XLOC_012865 NA non-coding downstream 3287053 31280850 ~ 31459487 (+)

Expression


Co-expression Network