G435889


Basic Information

Item Value
gene id G435889
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10606864 ~ 10607159 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU500353
CTGGGATTGTGTAGAGCCCTTTGAAGCTGCACTGAAACTGCAATTTGGACCTTCAACACGTTGGTCCCTGTTGAAGTCCACTATATGGAGAAAAATCCTGGAATGTTTTCCTCAAAAACCTTAATTTCTTTTTGAATGAAGAAAGAAAGACATAAACATCTTGGATGACATTTTTATTCTGAAGTCAACTAATCATTTAATTCCATTAAAAAAATACTTGCCAAAAAGTTGTATTAGTGTGTTTAGACTAAATATATTAAAAATGTCAGCTCAGACTCAGTGTCTGGACTCATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU500353 True 296 lncRNA 0.34 1 10606864 10607159

Neighbor

gene id symbol gene type direction distance location
CI01000306_10564069_10568262 CDC42P6, CDC42.L, CDC42L, BRAFLDRAFT_122664, CDC42 coding upstream 38307 10562840 ~ 10568557 (+)
CI01000306_10548464_10549530 C21H1ORF50, CLG25H1ORF50, CUNH1ORF50 coding upstream 57237 10548464 ~ 10549627 (+)
CI01000306_10429251_10466444 EPHA8 coding upstream 140013 10429251 ~ 10466851 (+)
CI01000306_10347562_10355420 NA coding upstream 251407 10346351 ~ 10355457 (+)
CI01000306_10332743_10335743 NA coding upstream 271015 10332661 ~ 10335849 (+)
CI01000306_10738169_10739341 SVBP coding downstream 131010 10738169 ~ 10741047 (+)
CI01000306_10751001_10756733 NA coding downstream 143451 10750610 ~ 10756775 (+)
CI01000306_10775550_10815981 NA coding downstream 168187 10775346 ~ 10826963 (+)
CI01000306_10975455_10976511 NA coding downstream 368168 10971973 ~ 10978046 (+)
CI01000306_11052174_11076357 CAMTA1 coding downstream 445015 11052174 ~ 11076496 (+)
G435878 NA non-coding upstream 79655 10512750 ~ 10527209 (+)
G435767 NA non-coding upstream 320372 10283638 ~ 10286492 (+)
G435764 NA non-coding upstream 345772 10256921 ~ 10261092 (+)
G435753 NA non-coding upstream 467686 10138919 ~ 10139178 (+)
G435750 NA non-coding upstream 471561 10134983 ~ 10135303 (+)
G436913 NA non-coding downstream 70206 10677365 ~ 10677606 (+)
G436973 NA non-coding downstream 122969 10730128 ~ 10730492 (+)
G436976 NA non-coding downstream 134765 10741924 ~ 10744824 (+)
G436978 NA non-coding downstream 156489 10763648 ~ 10763995 (+)
CI01000306_09891658_09893015 SNRPE other upstream 713625 9891532 ~ 9893239 (+)
G435639 NA other upstream 721945 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 743675 9860480 ~ 9865724 (+)
G435590 NA other upstream 869720 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 1321535 9263589 ~ 9289035 (+)
G436932 NA other downstream 475829 11082988 ~ 11098376 (+)
G437030 NA other downstream 662599 11269758 ~ 11271160 (+)

Expression


Co-expression Network