G436913


Basic Information

Item Value
gene id G436913
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 10677365 ~ 10677606 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU501483
ATGACGGCACATGCTAGTCGATGAGCTGAATCAACTCCACAGCAACTACATAAATTTATCCACTAACCATTTAGAAACGTCCAGTTGCATTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTTCATCAGTGTCCGACTCCGGTTTGAACAATGTAAGGCTGAACATCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGAAGCGTGAGCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU501483 True 242 lncRNA 0.43 1 10677365 10677606

Neighbor

gene id symbol gene type direction distance location
CI01000306_10564069_10568262 CDC42P6, CDC42.L, CDC42L, BRAFLDRAFT_122664, CDC42 coding upstream 108808 10562840 ~ 10568557 (+)
CI01000306_10548464_10549530 C21H1ORF50, CLG25H1ORF50, CUNH1ORF50 coding upstream 127738 10548464 ~ 10549627 (+)
CI01000306_10429251_10466444 EPHA8 coding upstream 210514 10429251 ~ 10466851 (+)
CI01000306_10347562_10355420 NA coding upstream 321908 10346351 ~ 10355457 (+)
CI01000306_10332743_10335743 NA coding upstream 341516 10332661 ~ 10335849 (+)
CI01000306_10738169_10739341 SVBP coding downstream 60563 10738169 ~ 10741047 (+)
CI01000306_10751001_10756733 NA coding downstream 73004 10750610 ~ 10756775 (+)
CI01000306_10775550_10815981 NA coding downstream 97740 10775346 ~ 10826963 (+)
CI01000306_10975455_10976511 NA coding downstream 297721 10971973 ~ 10978046 (+)
CI01000306_11052174_11076357 CAMTA1 coding downstream 374568 11052174 ~ 11076496 (+)
G435889 NA non-coding upstream 70206 10606864 ~ 10607159 (+)
G435878 NA non-coding upstream 150156 10512750 ~ 10527209 (+)
G435767 NA non-coding upstream 390873 10283638 ~ 10286492 (+)
G435764 NA non-coding upstream 416273 10256921 ~ 10261092 (+)
G435753 NA non-coding upstream 538187 10138919 ~ 10139178 (+)
G436973 NA non-coding downstream 52522 10730128 ~ 10730492 (+)
G436976 NA non-coding downstream 64318 10741924 ~ 10744824 (+)
G436978 NA non-coding downstream 86042 10763648 ~ 10763995 (+)
CI01000306_09891658_09893015 SNRPE other upstream 784126 9891532 ~ 9893239 (+)
G435639 NA other upstream 792446 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 814176 9860480 ~ 9865724 (+)
G435590 NA other upstream 940221 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 1392036 9263589 ~ 9289035 (+)
G436932 NA other downstream 405382 11082988 ~ 11098376 (+)
G437030 NA other downstream 592152 11269758 ~ 11271160 (+)

Expression


Co-expression Network