XLOC_012844 (kiaa1549lb)


Basic Information

Item Value
gene id XLOC_012844
gene name kiaa1549lb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 28102620 ~ 28156256 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025626
CTTGAGAGAATTTCCAGTGTGCCTAATGTGACGGTCGGTTACTATGTGACCAATGGAGAGATGGTATACAGTGCCTCTGTAGTTGTGGAGGCTCTTAGTGTCTATGGTATTGAGAGATTGATGGCAGACATCCGGCAGTTTGTGCCACTGGTGCAGGCCGTTCCCATCCCAGCAGTCCCCTGGAGACCCAGCCCTGCCATCTCACTGATGCTGAAGACAGTACTGCGGTTTGTAGGGCCAGGAGATGACATCAGGTCCTGCAGATTTACTCAGATGATGGAGCAGAGACTGGAGAATGCATTTGCTGAGGCTGAGGCCATAGTGATGAACTCACACAGCACTCTCGCTGTACAGATATTGAGCACATCTCAGTCTTTGGGTTCTCCTGCTGTATCTCTTATATATATGGTGCGTAATGGAAGTGTCACACTTAATGGCACAACAGCCAGTAACCTTCTCAGTCACCTGACCGCCGAACTTGTTGGCTACTTCCTGTTTTACCCTCCACTAATCACCGCTGAGCCTCTGGAATACCACAACATCAACACATCTGTAGAAACCAGACCGTTTTGGATTATCACAGTGATTCAGGATGTGTCAAACTCATCTCTGGAAGTGCAATACCAGAGCTTTGCCAGTCTAATGGAGGAGCGGCTGGCTGAGCTCTTCATGGTGGCCCACCAGCAAGGCGTTCGCTTCAAACGGGCAACAACAGTGGGCAGTTACACTGTGCAGATGGTTAGTATCAGGCGTGTTCATGGGACAAAAAACCCAGCTGAGATGACCTACTATGTCCAGCAAAATGGGACCCCAATGCTTGGTACATCTGCAGCCAAGCTTCTGAACACAGTGGACTCACAGACCATGGCGCTTACACTGGGATACTTTGTCCAATTGCAGGCTGAAGCCGTGGTGAAGAATCCACCCAACAACCTGTGGATCATTGCTGCAGTGCTTGCACCCATCGGTGTGGTgaccctcatcatcatcatcatcaccacggTCCTGTGTCATAAAAACAAGAACGATTTTAAAAGTGATCCTATCAGCAACTACAACCCTCGAGTGAAGCCTGTCCAGGGGTTTGACTATGCCAAGCAACATCTGGGTCAGCAGGGTGGTGACGAGGAGACCCTTCCGGTTACCCAGGAAACTATGATCCTGCCCCATCCCATTCGAGATGCTCCCCTGTCCTTAGATAAACCTGCACGCCAAGACGGATCCACTTCCAAGAAGAGCCTGAACAGTGAGATAAGGAAAAGTAGGTTGCCGAGTGAGGATGGTTCCGTCATCAGCAGCGAATCAGTGAAGGAGGTCTCAGGAAAGGGCTCGAGTGTGCAAAAAGCCACAGCGCAGCAGAAACTCACCAAGGAGGAGACGAGGAAGAGTAATGGTGAGAAATGCCTCCACTATCATTATGACAGTTCATCAGGATCACTTCATCTTATTTCCATAAAACCAATGGCAGCTCCACCCACTTACTCTCACCCCATGTCCTCCGACCGCAGCCAGGACTCTGCTGTATTTAATGGAGAGGTGAATTTGGCTCTGAAACAGAAGTCAGACATTGAGCACTACAGGAACAAGCTTAGACTGAAGGCCAAGAGGAAGGGTTACTATGACTTTCCTTCTGCTGAGGAGAAAAGCAGCACTAAAGACCTGAGTCAGAGGCACAACAGACCTCCACACCCTCACAGCAGAGCTCAGGAACAGGAGGACGACAGGGGCTCCACATATGTGAAACACCGCAGGAG
>TCONS_00025627
ttttttttttgcaacaatatATGACACAGTTTCTTCAGTGTGGATGTTTTTATGTCTGTATGTGTAGTACTGCGGTTTGTAGGGCCAGGAGATGACATCAGGTCCTGCAGATTTACTCAGATGATGGAGCAGAGACTGGAGAATGCATTTGCTGAGGCTGAGGCCATAGTGATGAACTCACACAGCACTCTCGCTGTACAGATATTGAGCACATCTCAGTCTTTGGGTTCTCCTGCTGTATCTCTTATATATATGGTGCGTAATGGAAGTGTCACACTTAATGGCACAACAGCCAGTAACCTTCTCAGTCACCTGACCGCCGAACTTGTTGGCTACTTCCTGTTTTACCCTCCACTAATCACCGCTGAGCGTAAGTGCTTCCTGGCATTCctgacccagcaggcacaggacgtcaacatgacatcgaATTGACGTTTTACCCCAACATCATggaatgttgcattttgtttgcagATGAAAATTGTGTTGATATCAAAACCCAACGTCAGTCTGACATCAATGTCGGACAGATGTTGTACTTTGgttacttttcaacacaacctaaaacaacaaaatatcaaggatattacagcttgatgttgtgtggaaaTTAACAATATGACAATAtgatcagacgttggattttggttgccatacctgacatataaatgtcagtatttgacgtcaacatgatgttggattttggtcactttccaatacaacctta

Function

symbol description
kiaa1549lb Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human KIAA1549L (KIAA1549 like).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-18 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human KIAA1549L (KIAA1549 like).

Ensembl:

ensembl_id ENSDARG00000062086

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025626 False 1754 mRNA 0.50 11 28102620 28156256
TCONS_00025627 True 727 mRNA 0.42 2 28106139 28107299

Neighbor

gene id symbol gene type direction distance location
XLOC_012843 hipk3b coding upstream 108823 27904515 ~ 27993797 (+)
XLOC_012842 si:ch211-222m18.4 coding upstream 279833 27821856 ~ 27822787 (+)
XLOC_012840 tspan18b coding upstream 289456 27732285 ~ 27813164 (+)
XLOC_012841 BX649600.1 coding upstream 365780 27736724 ~ 27736840 (+)
XLOC_012839 cd82b coding upstream 476229 27571448 ~ 27626391 (+)
XLOC_012845 CR769777.2 coding downstream 147635 28303891 ~ 28304317 (+)
XLOC_012846 spon1a coding downstream 408384 28564640 ~ 28880191 (+)
XLOC_012847 syt9a coding downstream 832117 28988373 ~ 29060842 (+)
XLOC_012848 ppfibp2a coding downstream 989425 29145681 ~ 29193708 (+)
XLOC_012849 CT025546.2 coding downstream 1018837 29175093 ~ 29175208 (+)
XLOC_012835 BX640463.2 non-coding upstream 906294 27196210 ~ 27196326 (+)
XLOC_012832 NA non-coding upstream 1104031 26997576 ~ 26998589 (+)
XLOC_012828 AL935332.1 non-coding upstream 1354693 26747811 ~ 26747927 (+)
XLOC_012825 NA non-coding upstream 1641193 26456681 ~ 26461427 (+)
XLOC_012854 NA non-coding downstream 1973515 30129771 ~ 30131831 (+)
XLOC_012863 NA non-coding downstream 2916987 31073243 ~ 31075619 (+)
XLOC_012865 NA non-coding downstream 3124594 31280850 ~ 31459487 (+)

Expression


Co-expression Network