G436983


Basic Information

Item Value
gene id G436983
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 11011724 ~ 11011998 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU501566
ACTGAATATACTTAAATAGTTATTTGCCATTTCAATATTTATTGATTATATTAGTCATTATTTATTATGCATTATTTTTATTATTATTTATATTATTTATTGAATTAAAGAATAAAATGGCATCCTTTTATATGTGTGCGAAAGAAAGATTAATGACAAGATTCTCACTTGTTTCTCCGAGACAGAAGTGAGATTACATGGAGAGCAAATGGATCCTTTTGCTTGAGTCTCTTACTTCTCATATATTTATTTCTTAGTTTCAGAATAGATCTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU501566 True 275 lncRNA 0.26 1 11011724 11011998

Neighbor

gene id symbol gene type direction distance location
CI01000306_10975455_10976511 NA coding upstream 34629 10971973 ~ 10978046 (+)
CI01000306_10775550_10815981 NA coding upstream 195648 10775346 ~ 10826963 (+)
CI01000306_10751001_10756733 NA coding upstream 254949 10750610 ~ 10756775 (+)
CI01000306_10738169_10739341 SVBP coding upstream 271835 10738169 ~ 10741047 (+)
CI01000306_10564069_10568262 CDC42P6, CDC42.L, CDC42L, BRAFLDRAFT_122664, CDC42 coding upstream 443167 10562840 ~ 10568557 (+)
CI01000306_11052174_11076357 CAMTA1 coding downstream 40176 11052174 ~ 11076496 (+)
CI01000306_11107383_11122980 PER3 coding downstream 95301 11107299 ~ 11123375 (+)
CI01000306_11139228_11152171 NA coding downstream 127230 11139228 ~ 11152218 (+)
CI01000306_11181222_11192574 NA coding downstream 169224 11181222 ~ 11192640 (+)
CI01000306_11202677_11210993 NA coding downstream 189611 11201609 ~ 11211208 (+)
G436960 NA non-coding upstream 13270 10990495 ~ 10998454 (+)
G436958 NA non-coding upstream 110359 10881107 ~ 10901365 (+)
G436978 NA non-coding upstream 247729 10763648 ~ 10763995 (+)
G436985 NA non-coding downstream 14128 11026126 ~ 11026492 (+)
G436986 NA non-coding downstream 15058 11027056 ~ 11027361 (+)
G436987 NA non-coding downstream 16300 11028298 ~ 11028780 (+)
G436933 NA non-coding downstream 112586 11124584 ~ 11125281 (+)
G436952 NA non-coding downstream 115557 11127555 ~ 11129064 (+)
CI01000306_09891658_09893015 SNRPE other upstream 1118485 9891532 ~ 9893239 (+)
G435639 NA other upstream 1126805 9878664 ~ 9884919 (+)
CI01000306_09860935_09865155 SH2D5 other upstream 1148535 9860480 ~ 9865724 (+)
G435590 NA other upstream 1274580 9704707 ~ 9737144 (+)
CI01000306_09263755_09288503 NA other upstream 1726395 9263589 ~ 9289035 (+)
G436932 NA other downstream 70990 11082988 ~ 11098376 (+)
G437030 NA other downstream 257760 11269758 ~ 11271160 (+)

Expression


Co-expression Network