Gene
RNA
| Item | Value |
|---|---|
| gene id | G436985 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 11026126 ~ 11026492 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU501568 | True | 367 | lncRNA | 0.27 | 1 | 11026126 | 11026492 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_10975455_10976511 | NA | coding | upstream | 49031 | 10971973 ~ 10978046 (+) |
| CI01000306_10775550_10815981 | NA | coding | upstream | 210050 | 10775346 ~ 10826963 (+) |
| CI01000306_10751001_10756733 | NA | coding | upstream | 269351 | 10750610 ~ 10756775 (+) |
| CI01000306_10738169_10739341 | SVBP | coding | upstream | 286237 | 10738169 ~ 10741047 (+) |
| CI01000306_10564069_10568262 | CDC42P6, CDC42.L, CDC42L, BRAFLDRAFT_122664, CDC42 | coding | upstream | 457569 | 10562840 ~ 10568557 (+) |
| CI01000306_11052174_11076357 | CAMTA1 | coding | downstream | 25682 | 11052174 ~ 11076496 (+) |
| CI01000306_11107383_11122980 | PER3 | coding | downstream | 80807 | 11107299 ~ 11123375 (+) |
| CI01000306_11139228_11152171 | NA | coding | downstream | 112736 | 11139228 ~ 11152218 (+) |
| CI01000306_11181222_11192574 | NA | coding | downstream | 154730 | 11181222 ~ 11192640 (+) |
| CI01000306_11202677_11210993 | NA | coding | downstream | 175117 | 11201609 ~ 11211208 (+) |
| G436983 | NA | non-coding | upstream | 14128 | 11011724 ~ 11011998 (+) |
| G436960 | NA | non-coding | upstream | 27672 | 10990495 ~ 10998454 (+) |
| G436958 | NA | non-coding | upstream | 124761 | 10881107 ~ 10901365 (+) |
| G436986 | NA | non-coding | downstream | 564 | 11027056 ~ 11027361 (+) |
| G436987 | NA | non-coding | downstream | 1806 | 11028298 ~ 11028780 (+) |
| G436933 | NA | non-coding | downstream | 98092 | 11124584 ~ 11125281 (+) |
| G436952 | NA | non-coding | downstream | 101063 | 11127555 ~ 11129064 (+) |
| G436994 | NA | non-coding | downstream | 136820 | 11163312 ~ 11164100 (+) |
| CI01000306_09891658_09893015 | SNRPE | other | upstream | 1132887 | 9891532 ~ 9893239 (+) |
| G435639 | NA | other | upstream | 1141207 | 9878664 ~ 9884919 (+) |
| CI01000306_09860935_09865155 | SH2D5 | other | upstream | 1162937 | 9860480 ~ 9865724 (+) |
| G435590 | NA | other | upstream | 1288982 | 9704707 ~ 9737144 (+) |
| CI01000306_09263755_09288503 | NA | other | upstream | 1740797 | 9263589 ~ 9289035 (+) |
| G436932 | NA | other | downstream | 56496 | 11082988 ~ 11098376 (+) |
| G437030 | NA | other | downstream | 243266 | 11269758 ~ 11271160 (+) |
