CI01000308_00003475_00004723


Basic Information

Item Value
gene id CI01000308_00003475_00004723
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 3297 ~ 4827 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_00003475_00004723.mRNA
ACTGATTATTCTGCCTGCCTTATCGACTACGTCTCTGCCTTATGTATTGGATTTGTTTGCTGATATTTATTAAACTTCCAGCATTTGGATTCCATCTTGCCTCCATGTCGAGTCCCTCACAGAATACTTCACCACCAATGGATCCAGCGGAAGTTTCTCAACTCCAAGCAGCTTATGCTTACCAGAGTGAAATCCTGAAGGGCTACCAGGAACAACTGGGTCATCTGAGTGCTGCTAACGAGAGTTTAACTCAGTATATCCGCTCTCTTCCATCTCCTCAAGCTACCCCGAACCCATGCAGATTGTTTACACACGGATTTCTACTGAGGAAAGGGAACGTCGCAAAAGGGAAGGACTATGTTACTATTGTGGAGGGAAGGACCACCAAAGCTCTGCTTGCCCTAACAAAGGGAGAAGACTTCTATACTCCAAGACCAGTCGTTAGTCGACTCAGGGGCTGCACTCAACCTGATTCATCAAGATCTTGTGCAAGAACTCCAGATACCCACAGTATCCCTGCAATCAACGTCACTGCTGTAAATAATGCACCCATCAGCACAGGCATCACTCACCAGACTGTTCCATTAACTCTCCGAATTGGGCTTTTCCACATTGAGACAATCTCCTTATGTCATCAACTCCCCCAAACACACTCTCATCTTGGGCCATGCATGGCTGGCTGTCCATGATCCCCTCATTTCCTGGCACCAGGGTGAGCTCAAACAATGGTCAAGTTATTGTGTGGCTAACTGTCTACAGGTTTCTGTTACCATGCCATGTCTCACCACCAGTATTGAAAGTCCAGAAAACCATACATCCACCACTATACCCAAGGAATATTCAGAGTTTTCAGAGGTCTTCAGTAAA

Function

NR:

description
pol polyprotein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_00003475_00004723.mRNA True 867 mRNA 0.46 3 3297 4827

Neighbor

gene id symbol gene type direction distance location
CI01000308_00012346_00036304 CLCA5.2 coding upstream 7148 11975 ~ 36413 (-)
CI01000308_00041387_00048067 NA coding upstream 36520 41347 ~ 48253 (-)
CI01000308_00110535_00111604 NA coding upstream 104774 109601 ~ 111658 (-)
CI01000308_00474123_00482394 NA coding upstream 469237 474064 ~ 483464 (-)
CI01000308_00529728_00530015 NA coding upstream 524791 529618 ~ 530145 (-)
G437593 NA non-coding upstream 43906 48733 ~ 48981 (-)
G437594 NA non-coding upstream 44407 49234 ~ 49462 (-)
G437620 NA non-coding upstream 107001 111828 ~ 112172 (-)
G437622 NA non-coding upstream 109498 114325 ~ 114628 (-)
G437625 NA non-coding upstream 115124 119951 ~ 120204 (-)
G437635 NA other upstream 130481 135308 ~ 135685 (-)
G438434 NA other upstream 942729 947556 ~ 957849 (-)
G438671 NA other upstream 1772768 1777595 ~ 1782581 (-)

Expression


Co-expression Network