CI01000308_00474123_00482394


Basic Information

Item Value
gene id CI01000308_00474123_00482394
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 474064 ~ 483464 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_00474123_00482394.mRNA
AGGGAAGGATGGAATAAGAGGCCACTTTTGGCGCTTTTCCACTGCGTGGTACTACTCAGCATGGCTCGGGTCGTTTTACGTTCGGTTTGGCTTTTCCATTGCAGTTAGTACTGCTTCAAAGTGGGTGGGATTATAGACTGATCATTATAGTTGTGCCACCTCTACTGCCATGGATCAGCTCCTTGGCTACCAACGAGTCTGCACCTCTAATGACCACGATACAGCCATTTCTTTTTTTTCAAATTGCGACAGTCTTTTAAAGCAAGTCATTTCGCGAACAAATGATACTGTGGTGGCTGTTACTGCCTATTTAAATCTAGCGGGTTTGGTGCCTCCTGTTTGTAATCCAATGATGCTGGTAGTGACAATTCTCTCTGACCAATCAGTAATCTGCAGTGTTTACATGTCACATTTAGTATCACTACGGTTCGCTTGGAACCTGATGATGTGTTTAGTGGTGCGAGGGCGTGACAACATGTCACTCAAATCGACCAATCACAACCATCCAATCAATTCCCAATGGACAAAATCAAATCCCGCCCTACAAGCTGTTTTACTCGAATGTTGTAACTTCAGTTGAAGCTGAACTTCTTTTAACTTGAGTGTCACATTTTTAGAACACCTTGTTATGCGCGAGACATAGTTTGCCACACGTAAGTTGAAAAATATGACATGTAAAATGCTCTGCTAATCTATTCATTTATCTTTTGTAATATAGGTCTTCAAACAGCAACATAAAATATTGGAGAAATGCTACTCACCCAACATAAACAATGTGAAAGCTGTTGCTTTTTCGCTGCAGCACCACTTATGTGTCGCTTATGCATGCGGTGGGTGTGAAATGGGCTTTATTGTGTGTTTGGATGAGGTTGCTGATTACATTTTTGTAATTAATTAGTAATTTCTCCAGGAATACATTTCTAAATCCCTCCCATCTCTGGCTGCTGCTGACACATTCAGAAAAGAAAATCCCTTCGTCTGTTTGCCTTCCCAACACATTTTGTCCCAGATCCTGATGTCAGCTTGTGAGAGAAAGGCGTCTAGGAGGGGTTTCGGTAACCACATTATCCATGTTCTTTACAGTGGCTGAGTCTCCTGGAACCGTTCAGACGACAGATCAAAGCCTCACGCTCTGTCTGTGCTGGTCCAGCTACTCTGGTGATGCTACCCATCAGCCCTGGCTCCAGAGACAGGCTTCTACCTTCACAGACCACGGCTTGGATTGTTTCCCTGAAGTGCGGACATTGGGCTTTGATGTTTGCATGATTGAATGGGAGGAGGATGATGAATATCTAGAGGAAACAAGAGAGAAAAACAAGATCAGAGCCCTTGGCAGAAGGTGTGAAGCTTCTGAAGAGATAAGAAAAGACTGCAGCCCTTGCCTAGTCACCGTGGAGCTGCTCACAGCTCCTTTAACTGGCAGACTTTTGAACAGAGACCAACTGATTGCGTATGACATCGGCATCAAACACCTTTCTGAGGTCACACATAGCCAGGCCACATGTGTCCTCAAATTCAATCAATATTTCATCAAGCGAGTTGCAACTTAATCGACTGCTAAAGTTTCTGAGTGCTGTTTATTCTCTGACAACAAATACTAGAAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_00474123_00482394.mRNA True 1609 mRNA 0.43 3 474064 483464

Neighbor

gene id symbol gene type direction distance location
CI01000308_00110535_00111604 NA coding downstream 362406 109601 ~ 111658 (-)
CI01000308_00041387_00048067 NA coding downstream 425811 41347 ~ 48253 (-)
CI01000308_00012346_00036304 CLCA5.2 coding downstream 437651 11975 ~ 36413 (-)
CI01000308_00003475_00004723 NA coding downstream 469237 3297 ~ 4827 (-)
CI01000308_00529728_00530015 NA coding upstream 46154 529618 ~ 530145 (-)
CI01000308_00711286_00720426 NA coding upstream 227752 711216 ~ 720712 (-)
CI01000308_00750618_00755764 NA coding upstream 266323 749787 ~ 756480 (-)
CI01000308_01027964_01028971 GPR184 coding upstream 542381 1025845 ~ 1028971 (-)
CI01000308_01060962_01079388 PRKD2 coding upstream 577415 1060879 ~ 1079388 (-)
G437702 NA non-coding downstream 156126 226584 ~ 317938 (-)
G437685 NA non-coding downstream 232649 191063 ~ 241415 (-)
G437640 NA non-coding downstream 331151 141598 ~ 142913 (-)
G437639 NA non-coding downstream 332607 141253 ~ 141457 (-)
G437633 NA non-coding downstream 342163 131584 ~ 131901 (-)
G438262 NA non-coding upstream 7426 490890 ~ 491161 (-)
G438286 NA non-coding upstream 67397 550861 ~ 551099 (-)
G438313 NA non-coding upstream 109525 592989 ~ 593241 (-)
G438317 NA non-coding upstream 134523 617987 ~ 618219 (-)
G438302 NA non-coding upstream 173619 657083 ~ 669785 (-)
G437635 NA other downstream 338379 135308 ~ 135685 (-)
G438434 NA other upstream 464092 947556 ~ 957849 (-)
G438671 NA other upstream 1294131 1777595 ~ 1782581 (-)

Expression


Co-expression Network