CI01000308_01003736_01006059


Basic Information

Item Value
gene id CI01000308_01003736_01006059
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 1003736 ~ 1007117 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_01003736_01006059.mRNA
TGGTAAATGACATCAGATACACACTACTGCATGGCAAACTGGGCACAGAGGATCATTTATGGATGTGGAAATGTGGAGATGAACAATATCTTAATTGTGGAACAACACTGAGGGACATCAAAACCGCACCTTGCTATACATCAAGATTTGTGCATCAGGTAGAAATGGATCCTCTTCTGGAACAAGTTTTGGCTGGCTTTAACGCAACCCTCGGAGCTTCGAATCGGACAGACCCCCTGGATAAATTCTCGGGAACCCAGCTGCTTTGGCGCTTCAAACCTCTGTTTATCCCGCTCTACGCCTTGGTTGTTGTTGTAGCTGGTGTCGGGAACAGTTTCCTTCTTGCCTGCATTCTGTCAGACAAGAAGCTCCACAATGCCACCAATTTCTTCATTGGCAACCTGGCAGCTGGGGACTTGCTGATGTGCCTGAGCTGCGTGCCGCTGACCGCGTCGTACGCTTTTGATGCACGTGGTTGGGCGTTCGGACGTCCAATGTGCCACCTTATTCCTCTGCTGCAAGGCGCAACGGTCTTCGCCTCTGTATTATCCCTCACTGCCATCGCCATGGACCGTTACGTGGTGGTGGCGTACCCGGTACGGAGGCGTATCTCTGTGTGGGGCTGTGGCGCAGTGGCATTGGGCGTCTGGGCAGTTTCGTTGGCCCTTGCCGCTCCCCCTTCCCTCCACACACGCTACGTGGACCTGCGACCAAGTGGCATGGAGCTGGTAGTATGCGAGGAGTTCTGGCTGGGTACCGAACGCCAGCGCCTACTCTACTCCTGCTTCTTCTTGTTGGCGTCCTACATGATCCCCCTGTTGTCTGTTAGCATCTCCTATTGTGCCATCAGCGTGCACCTCCGCAAACACACACTGCCTGGAGAGCCCTCTCAAAGCCAGCAGCGATGGAGCAAGCAACGGCGCAAGACTTTCTCCCTTCTGGTGGCGTCTGTGCTTGCCTTTGCCCTCTGTTGGCTCCCGCTGCAAGTCCTCAATCTCCTTCTGGATCTAGACTCAGACTTCCAGATTGTTGACAAGCGCTACGTCAACGTGCTGCAGGTCAGTTGCCACCTGATAGCCATGAGCTCAGCCTGCTACAACCCCTTCATCTATGCCTCGCTGCACAGCAAGGTCCGCATGCACCTGCGGGGTTACCTGTGCCCCTGCAGGCGTAGTGGGCAGAAGCTACTCTCTCGCTGTGCCTCCCGCAACCCTGCCACCTGCCTGACGCTCATCTCCGAGGTAGCGGTGAAAGAGAGCCAATCACCTGAGAGCCCTGTCCCTGACAGCTGCCTCTGAAGATGCACAGACTAATCAGGAGCACTCAGACATTAAGGAGGTTTCGCAGCACTGGAGAGGTATCCCAGCCAATATTTAATGTTCTTATCTGAAAACGAAGGCTTTGTTGTTGGTGGGCTTTTCTTTCATGAGATCTAAAAAGAATACTCAGGCTCTCAGCATTGTTTTGATGTTACTGTGGACATTAGTGATCCAGGCTCAAAATTCCCTGCAGTACATCTCTTTGACCTTGAATGAATACTCCTGACGTTAAACACATTTACAGTGCAGCTTTTACTGGAGGAGTAAATCCGTTTGGGAATACCCTGTCTTTGAACCCACCACGGCCAAGGGGAATATCAGCAAACAACAACTAGATGTTGACTGCTCTTTTTCACTTCAGTTCCTTTCCTTCTTTTTTTCTGCTAATAACAAGTAGCCAGAAAAAAGTCAGGTGTTTTGGCTGAGGTACCTCTTACCCGTCCCTTCTGACTCGGTTATATCCGCATTTATATGATTAGCGGTTAATTCTGTCCCTTTAGCTCAGAGCCATGTCAGAAAACAAGTGATGCAGAACATCTTATAAACCCTCTCAGCCTCACAAGCCTCTATAAGGATCACTGCATGTCTGATATAGATCACTGTTCGGAAATTTGTCCTCAGAGCCTCTCACTCTCAAGTCCAGACACTCTCAAGAGGGCTCTGGCAGTCAGAGTTCAATCAAATGACAGCCTTTCGCCTCTGGTAATGGACTGCACACTCTGCTTTAAGACACATACGAGGCACATGGCTTGCACTGGAACACTTCTACATTTCTGAAGATAGGCATAGTTCTACGAAATGTTCAACAGAGTGAGTCTGACCTTTTGTAAGTAGCAGGAGCTAAAGTGATGATAATTTCACAGGAGCAAGTGCCGTGTTTTGCTATTATGTGGTTTTGTCATTTCCCTCGGAGAGCTGTGAGAATTGATGTCTCATTCTAACAGTTCTCTGGAGGTGTGAGATACATTTAATTAGATGATCTACAAGGCATTCACACTACACTACATTACTCATCAAGTGAACCTTTTCTCAGATGA

Function

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_01003736_01006059.mRNA True 2356 mRNA 0.49 2 1003736 1007117

Neighbor

gene id symbol gene type direction distance location
CI01000308_00983925_00991307 NA coding upstream 12347 983925 ~ 991389 (+)
CI01000308_00836074_00942387 DSCAML1 coding upstream 61349 836074 ~ 942387 (+)
CI01000308_00770560_00784179 NA coding upstream 217940 770272 ~ 785796 (+)
CI01000308_00695140_00699646 SCN4B, SCN4BA coding upstream 303835 695140 ~ 699901 (+)
CI01000308_00657092_00659557 SCN2B coding upstream 343248 656991 ~ 660488 (+)
CI01000308_01132580_01134190 FKRP coding downstream 124908 1132025 ~ 1134414 (+)
CI01000308_01594565_01626825 CADM2, CADM2B coding downstream 587448 1594565 ~ 1626825 (+)
CI01000308_01645574_01648364 CADM2 coding downstream 638416 1644246 ~ 1648567 (+)
CI01000308_01667660_01683460 MIPEP coding downstream 660543 1667660 ~ 1683598 (+)
CI01000308_01751621_01754826 NA coding downstream 744424 1751541 ~ 1755020 (+)
G437853 NA non-coding upstream 110501 878439 ~ 893235 (+)
G437941 NA non-coding upstream 171583 831892 ~ 832153 (+)
G437939 NA non-coding upstream 180586 822724 ~ 823150 (+)
G437938 NA non-coding upstream 181075 822389 ~ 822661 (+)
G437929 NA non-coding upstream 206850 796462 ~ 796886 (+)
G437854 NA non-coding downstream 39329 1046446 ~ 1048498 (+)
G437952 NA non-coding downstream 47498 1054615 ~ 1058043 (+)
G437985 NA non-coding downstream 78219 1085336 ~ 1087243 (+)
G437837 NA non-coding downstream 103641 1110758 ~ 1114271 (+)
G437843 NA non-coding downstream 130469 1137586 ~ 1167949 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00013451 NA coding CM030125.1 CM030125.1 31149173 ~ 31150309 (+)