CI01000308_01667660_01683460 (MIPEP)


Basic Information

Item Value
gene id CI01000308_01667660_01683460
gene name MIPEP
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 1667660 ~ 1683598 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_01667660_01683460.mRNA
GCTCAATACCAATGTTGAATTGTGTAAGAGCTTAAAGGACCTGTTGGATAACAAAGAGATCTTTGCCAAACTGGACCCAGAGACAAGAAGAGTGGCTGAACTGTTCATGTTTGACTTCGAAATAAGTGGAATCCATCTGGATAAAAAAAAGAGGAAAGAGGCTGTGAACTTGAATGTGAAGCTGTTGGATCTGAGCAATCAGTTTCTCATGAGCTGTCACATGCCCAACAGAATAGAGAAGAGAGTCCTTCCTGAACACATTCACCAGCACTTCAGTAAAGACGGAAAGTACATTCAGATCAGCGGTCTGCATGCGGACGCACCTGATGATCTGGTCAGGGAAGTTGCATATAAAATTTTCCTCTATCCGAACGCAAATGTGATGCACATACTTGAGGAACTTCTGGCCTGTAGAGATAAACTGGCTCGTTTGGTTGGTTATGAATCTTATGCACACAGAGCATTAAAGGGAACCATGGCCAAAAGCCCAGAGGCAGTTATGAGCTTCTTACAGCAGATCACAGACAAGCTCTCAGACAGGTTGAGTTTTCTCTCTTCAAAATTTGTCAGTTGCATTAATCATGGATGCATAATAATGAATATATTATGTGCAAAAGAACTAATGCCATGGGACCATCCATACTTCAGTGGTGTGATACGTGCAGAAAGATTCAACATCGAGCCAAGCCTGTACAGTCCGTACTTCTCGCTGGGAGCATGTATGGAAGGTCTGAATGGTCTTTTCACACAGCTGTATGGTGTATCACTGCTGGCTGAGCAGCCCAGTGTGGGGGAGGTCTGGAGCGAAGATGTGCGCAAGCTGGCTGTGGTGCATGAAACAGAGGGACTGCTGGGATATATCTACTGTGACTTTTTCTACAGACCTGAGAAACCTCCCCAGGACTGCCACTTTACCATTCGTGGAGGGAGGCAGTTGGATGATGGCCAGTATCAGCTGCCAATGGTGGTCCTGATGCTAAACCTGCCCCACCCCACGCAGTCCGCTCCTACGTTACTCAGCCCGGGCATGATGGAAAATCTCTTCCATGAGATGGGCCATGCCATGCACTCCATGCTGGGACGTACCCGCTACCAACATGTGACGGGAACGCGATGTAGCACTGATTTCGCAGAGGTGCCCTCTATTCTCATGGAATACTTTGCCACAGATTATCGAGTGATCAGTCAGTTCGCTCGCCACTACCAGACTGGACAGCCTTTGCCGCAGAGCATGGTGGCCCGTCTTTGTGAGTCCAAGAAGGTCTGTGGTGCGGCTGATACTCAACTTCAGGTTTTCTATGCAATCCTGGATCAAGTTTATCATGGAAAACCACAAAACCGATCAACAACAGACATCATGATAGACATGCAGAAGAAGTATTATGGCCTGCCATACGTCACAAACACAGCCTGGCAGCTGAGGTTCAGTCATCTCGTCGGCTATGGGGCGAAGTACTACTCGTACCTGATGTCACGGGCTGTGGCCTCCATGGTGTGGAAGCAGTGTTTCTATAAAGACCCCCTCAACAGGGAAACCGGAGAGCGTTACCGCAGAGAGATGCTGGCTCATGGAGGAGGGAAGGAGCCCATGCTGATGGTGGAAGGTAAGAAAAAAGTCTGCACCTGAGAAAATGAACACAAAGTTAGTTCAGCCACTGCCATTTCTTTGTCCCTTAAAGAGTCAACATCAAAATTGACCTTATTTTCTATATTAGTATGTGTGTCTGGTGTTATTGAATGATTATTCAGTGCATGTAAATTATGA

Function

symbol description
mipep Predicted to enable metalloendopeptidase activity. Predicted to be involved in peptide metabolic process and protein processing involved in protein targeting to mitochondrion. Located in mitochondrion. Implicated in combined oxidative phosphorylation deficiency 31.

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01410 MIPEP; mitochondrial intermediate peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_01667660_01683460.mRNA True 1765 mRNA 0.47 14 1667660 1683598

Neighbor

gene id symbol gene type direction distance location
CI01000308_01645574_01648364 CADM2 coding upstream 19093 1644246 ~ 1648567 (+)
CI01000308_01594565_01626825 CADM2, CADM2B coding upstream 40835 1594565 ~ 1626825 (+)
CI01000308_01132580_01134190 FKRP coding upstream 533246 1132025 ~ 1134414 (+)
CI01000308_01003736_01006059 NA coding upstream 660543 1003736 ~ 1007117 (+)
CI01000308_00983925_00991307 NA coding upstream 676271 983925 ~ 991389 (+)
CI01000308_01751621_01754826 NA coding downstream 67943 1751541 ~ 1755020 (+)
CI01000308_01757068_01765055 NA coding downstream 72272 1755870 ~ 1766109 (+)
CI01000308_01775458_01781291 NA coding downstream 91814 1775412 ~ 1781291 (+)
CI01000308_01829826_01849607 NUMBL coding downstream 146228 1829826 ~ 1850544 (+)
CI01000308_01855056_01857722 NA coding downstream 171125 1854723 ~ 1859663 (+)
G438036 NA non-coding upstream 125795 1534018 ~ 1541865 (+)
G438032 NA non-coding upstream 133872 1421020 ~ 1533788 (+)
G438033 NA non-coding upstream 204230 1443373 ~ 1463430 (+)
G438100 NA non-coding upstream 254550 1412751 ~ 1413110 (+)
G438170 NA non-coding downstream 49806 1733404 ~ 1734202 (+)
G438174 NA non-coding downstream 57961 1741559 ~ 1741931 (+)
G438125 NA non-coding downstream 106869 1790467 ~ 1798846 (+)
G438130 NA non-coding downstream 137717 1821315 ~ 1857127 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008314 mipep coding NC_007126.7 CM002899.2 8192715 ~ 8235529 (+)