CI01000308_01855056_01857722


Basic Information

Item Value
gene id CI01000308_01855056_01857722
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 1854723 ~ 1859663 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_01855056_01857722.mRNA
GTTTAAAATGACCACATTTCTAAGGAATTATGTAGAATTAATCTCCATCACCACATTAATGTCTTCGGTATGGTCCGTCTGGGGCTATGAAACAAAACGGAAAATGTTGATGTGCTGCTCCATTATTTCACTATACTGGTTATGTATGGTTCCTCTTGTTCACAACAATCTAATAGAGACCCTTGAAAAGATTTATGAATGGACTTTTTGAAATTAAAAAGTCACAGACCATCAACCACTATTAGTGCCTCTTTGTGTGTCAGAAGCTGAGGATCAGAATTGTTAAATGGACCCAAGCAAGGCGCCATATCTTCCCCGGGGAAGCGTGAGAAAATGAGAATGCTTTCGGCGGTGGAGACTCTCCTCTTATTGTCCTGCACCCACAGAGTGACTGTGTGGATGAGGGGGAAAACGGGACAGTGCAGGATAAGTTGCCATGGATACAGAAGCAAAACAGCCATTAATAATCATACAAAAAGAGCCACAGTAAGCAGAAAAACACTGGGCACACGGATAAAAATTAAACTCGCAAAGGCTTCCAGTATAAGAGAGGACACTGATTTGATAGCTGACCCCTTCAGTAACCATGCTTCATGTGATGTTCTTAATGATACTCACACAAGTGCTGACATAACAATCAGTAAACCCATTTCCTGTAGATGTGATGAGGCCGGCTGTATGCCAGACAGTAATGTTATAAATGGAGGAAATGCCCTTGAGCAGGAAATCTGGACCTCTACCTCCAGATGACCTCACATTTGTTCACTTACAGCACTACAGCCTATAATTTTCCATAGATCTCTGTTATCTTGTGAATCAAGAGGGCAGGCTGTTTTCAAATAGCTTTAATGTTCTGAGTAAACCTGAAAAACAGTACCAGCCAATCAAAACAAAGATTGCAGGATTGTCAAATGCAGGTGGAGTTATATGCAA
>TU502867
CAAATAGCTTTAATGTTCTGAGTAAACCTGAAAAACAGTACCAGCCAATCAAAACAAAGATTGCAGGATTGTCAAATGCAGGTGGAGTTATATGCAAATAAAACCATTGCTTTGGTTAAACTCCTTTATAGAAGACCACAATGCTCTATTCCGGATAAAAGTACAAAGAGTAGAAGCAGAACTGTAAAACAAACAAACAAAAAACATCAAAGTTAAAAAATTCCACATGGATTCTCTCAGATCAAATATGAATAAAGTGCGTTATATAAGCCATTTTACTGTACATGTTAGGAAACCAAGAGTAATCCTGCTGTGATGCTCAACATTCAGTCATCAATGTTCAGTTTAGCGTATATCTGCATTAACCCTTAAACGCATACCTCAGGTCTTTAGTGACCTGGGACGTCATTAGACATCAACCTTCTTACTATTCTTCAATCAATTCATTATAAACAATATAACAAGAAAAAAAAGAATAAAATTATAAAAGAATGCCTGTTTTCCCATTAATTTTTTTGTAAAAATTGTATATGGTCACTAACAACCTGAGGTGTGTAATAGTGTGAGTATATTTTTTTCCTGCACAACAATAAATTAATCTTTGATGACTGAATAAGTGCAATTCACCTTTATTCCACAAGGTGGCAATGTCTGATACACAATGATGAAGTGACATTTCACTCATAGTTGCTGCAGGCAGAAAACAAAAGAATAGGAAGTATCATCAGCAAAACTTCAAACGGCTCAGCGATTTACTGTTCAAAAATCAAATATTAGTGTCACTGTCACTTGATAGTGTATCTGGTGAAGATGCTGTCAGTGATAAATATTGATTTTGAAGATGTTGAAAATGTTTTGAGAATATGTTTGAGATCGCGAATATGAGCCAGATGCTGAATGAACTGGGAAATGAGCTCTAACATCTGCTCAAACTGAACAAAATATGCTTTATTTTATTCTTCTGTAACTGTTACTCTAATATCAGGAAAGTTTTATATTATTGCAACAGATCCATCCGTGTCAGAAATACATCAGGGTCGCTAAAGACCCGAATATGTAATAATGATTGGCGAAACATTCATGCATTTAAGGGTTAAATGTCATACACAGCCACATTGTGAAATCATCCTGTTATATGTCACTACTGTCTATATGCAAGATAGTTGTTGAGATCCATTAGGCACCGCAAATGCTGCTGAATAATTCCATTTTCAATATATATGTACAGTTTGCATCTTATGTATTAGATAATATGGCTCTCAACTAATGAAAGTTGATAGTAAAGATTAGATAAAGTGCAGTCGTCAAAAAAAAATTGAGTATTAAAGAACTATAACAAAAAAAAAAATAATGAGATGTGAGCTCACAGGATTCAGCACATGATAAACTGCATTGTCTTAACTGGAATGTGAATTCTAGGCTCTACTTCTGTTGCTCTGTTCCTGGAATAAAGTATAAAACTACCAAAAAAAAAAAAAGGTAAGGCTGATATCTCGTATTCAAATGCTTCTTTATTAGTGTGAAACATCTCCTACGTACTGTATATCAAATGATAATTTACTAAACATTAGATATGTTAATATTTACTGCTCTCTGTCTTTTAGTCTGTTATCTTATCTTTGGGATAAAAATGTAGAGATGTTTAAATTATTTACAGAAATGCACTTTTAGAAGGCGATTCGTTTTCAGTGCCAGCACTATAGTCAATAGCTAGAATCTATCAAAATCCATTAAAATTTGTATTTTCTCTTCTTTTTAATTTCTGCAGCAAATCTAACAAAAAAAAAAAGTAAAGTTCTGGGTTTATTCAACCCCATAGTCAAAATAAAAAATACATACTTTACATACCAATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_01855056_01857722.mRNA False 933 mRNA 0.41 3 1854723 1857905
TU502867 True 1855 lncRNA 0.32 1 1857809 1859663

Neighbor

gene id symbol gene type direction distance location
CI01000308_01829826_01849607 NUMBL coding upstream 4179 1829826 ~ 1850544 (+)
CI01000308_01775458_01781291 NA coding upstream 73432 1775412 ~ 1781291 (+)
CI01000308_01757068_01765055 NA coding upstream 88623 1755870 ~ 1766109 (+)
CI01000308_01751621_01754826 NA coding upstream 99703 1751541 ~ 1755020 (+)
CI01000308_01667660_01683460 MIPEP coding upstream 171125 1667660 ~ 1683598 (+)
CI01000308_01894236_01939093 DPF1 coding downstream 36331 1894236 ~ 1939888 (+)
CI01000308_01951635_01956348 NA coding downstream 93730 1951635 ~ 1956362 (+)
G438125 NA non-coding upstream 55877 1790467 ~ 1798846 (+)
G438174 NA non-coding upstream 112792 1741559 ~ 1741931 (+)
G438170 NA non-coding upstream 120521 1733404 ~ 1734202 (+)
CI01000308_01645574_01648364 CADM2 non-coding upstream 209103 1644246 ~ 1648567 (+)
G438130 NA non-coding upstream 682 1821315 ~ 1857127 (+)

Expression


Co-expression Network