XLOC_012861 (cd151l)


Basic Information

Item Value
gene id XLOC_012861
gene name cd151l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 30998472 ~ 31023447 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025664
TGCGTTTACCTCGTTGTAAAAGTGGTAGCAACGTAAATAAAATGGTTACGACGTCCACTACACGTCATCGCGCTAGAGGTTTGGTAGTTCAGGACCTGTCTCTGGGAATTTTTTCTCTAGGATCTGGCAACCCTTGCCTGCTTTGTCGGGGTGGAGCTGAGCACGTTTGAACTGATTTTTTTCTGAGCTTTTTTGTTTCTCATGTAGTTTTTACAGGGACGAAGTCAATTAATTAAGTGTAAAAACCTTTCATCGAATGAAGGCAGATCCATTTTTAACCCTTTTCTGTGTTTCGGTTTCCCTGAGTGATATCGTCTGGTAACGTAAAAGGatgGGGGCAAATGAAGAGAAGAAGGAAAAATGTGGGACCATCTGCCTGAAATATCTCCTTTTCACATTCAATTTTCTGTTTTGGctTGCAGGAGTTGCAGTGATGGCTGTGGGCATCTGGACAGTAATTGAAAAGAGCGACTACATTAGTCTGCTGTCCTCAAAGATTTATGCTGTCTCTGCTTATATACTCATCATGGCAGGGGTGATTGTCATGATTACTGGAGTTTTAGGCTGCTGTGCCACCTTCAAGGAACAAAGACGCCTACTGAGAGTGtattttgtttTACTGCTGTGTATATTTCTGCTGGAGATCCTGGCTGGAGTTTTGGCCTACATTTATTACCAACAGCTAAATGACGAACTGAAAGAGAACCTGAGGGAGACAATGGTTCAGAAATACAATCAGTCTGAGCAGGAGCATGTAACTAAGGCTGTGGACAAGTTACAGCAGGAGTTCAAATGTTGTGGCAGTAACAGCTCATCTGATTGGGTGGACAGTGCTTGGATCCGCTCTAGTGAAGCTGATGGTCGATTGGTTCCTGACAGTTGCTGTAAGAGTCCAGTCAGAAAGTTCTGTGGTCGGAGAGACCACCCCtcaaatatatataaagtagAGggtGGTTGCATCACAAAGCTGGAGAACTTCATTCTGAATCACTTACAGATCATTGGTGCAGTTGGGGTGGGCGTTGCCTCTGTGCAGATTGTTGGCATGTTTTTCACCTGCTGCCTATACAGGAGTTTAAAATCAGAGCCATACTGAAGAGTGACAGCTCAAATACTTCATAGATCACCCTATATTGTGTttcttttctgttgttgttgttgttgtttggtgAATTTCTACAAAAGAAATTATTGAGGCTTTAGACCATCTTCTAACACTTCCAACAACACAAGAGAATATTTCTTACATATCCAGTAATAAATATAGATTATTACATTTGTATTAACTTTTAAGTACTACTGATCATCAGAGTTCATTTTAAAACcctttttataattgtttttgatGATTTTTCATAATTTAGTAAGTTAAACCAGAttgtactgtattttatatatgaaacctttgtatgtacttttttgtttgtcAAAATATAAATCTTCTTTCACAAGACATGTATTTGGGTTCTGCTTCTTAATACTGCCATAATTATTATGAAATACAATTGGTTTTTGATATAATATAACTAACTGTTAATTTCAGAATTTTAAAGGCACTCTGGTGTGTTAAGATTTTTATGGCTTGTATATGAAGTATAAATGATGCATAtcacttaaacattaaaaatcaacATAAATCTAAATAACATCCATTAAAAATAGTGATAGTTATAAGTATATGCTTCTAGCATTTTTTCCCCCTCAAGGAGACTAAATGCTCCTGGATGTTAAGTGAAATTCATGCTGACTGTTAAAGCTTTAGATAATGATAAAAGTATAAACTGGAATAATTCAGCATTGTTTATATGGAGAGCAATTTTAAAATCTAAGGAGGTCTGATTGTCTTGACACTCCTAAGCACACTTGTCCAGCACTTTTGTACATGTCAGTTTTATCACCATTAAGCACGACCAAGGGTTGACCAATATGCTGCAGTcaaaaaaaaagcaattacttctgttaaaaacataaaatgccAATGAAAATAGCTTATTTCACAATTTAGGACCAGCTACTATGAAAGCCTGGTCACATCTGCCTTTCAATCTCAACTTAGAAATACATAGTAATGCCTGATTTAACGATTGAAGACCCAGAATGGGTCGAGGTAATCGAAACTGGGAATCGATAAAAATTTTAATCGATAAGTGAAATCAACCTGGAATCTGAATTGATACAATTCTAATGATACCTAATCTAGGtcttaaatcctattaaacaggtcttatttttgcttttgcttttttcaGGTAATGCTATCTCGTCAGTACTCCCTTATAACTAATGTTTATAATTTGCCGATAGAGTGTTTTGTCAATATGTGTGCAAATGCGTTCTGTGTATGAGAGGTGCTGGTGCTAGCTTTGACTGTCTGCTAAATCTACATCTAGCTGGGTTTCATGTGTCCTGTATATGTACCATCAAGAGTTTAAGGTAAATCCTGTTTTAAATGGAATTCTGCTGTCATAAGTGTtcagtttatttttgtttgagcacaaaatactgaaaaaaaatatgacaATCTATGcagtgtataaaaaaaatataatatttagataatgcttacataACAccgttaaataaaataacatgagAGCATGTGATCATCCAAGGACAGAGAAGTAAAGAGGCTCTTGCTCCTTTCAATTTGCATATAGGAGCAACAGGGGGACAGATGATGCAATGATAGCAGTGACTCatcatattaataaacatttagagGATCCAAACTCATATGCGCGacttttatttgttgattttagttCAGCTTTTAACATGTTGCAGCCAcatcttttaattaaaaaattgaatgaatttaaAGTTCATCCATTATTAattaaaaggtattacttttttcTAACTGATCAAAGGCAGCAGGTTAGTGTAAATGGTACAATTTCTGAGCCAAAAATTTCTGAGTATGGAAGCTCCACAGGGCTGCGTTAGCTCACCTGTTTTGTTCACTCTGTATACAGATTCATGTAGATGTTCTTATTCTAATAATTACATTGTTAAATTTTCAGACAATACTGTCATCTTAGGGTTGTTGAATAAGAATAGAgatttatctaaatatttttcaGAGATTGGAAGATTTGCGAGTTGGTGCGACGACAATCTTTGAGATTTGAATGTCAGTAAGACAAAAGAGATGGTGTTTGACCCTAGAGGAATTGGTGATCATAGCCACTACCCAGTTGTGCATGTGTCTTGTGACAAGAAAATGTAATTGGTTCGATACAGAAACCTCAGAGTACAAATTCTTGTTTGGTTGCATAGTCACAATATCAATTCAAGGCAAATAACACAGAGGTCACTGTCTGGCGCTAAACTATGTAACCAAACAAGAATTTGTACTCTGAGGTATCTGTATCGAACCAATTACATTTTCTTGTCACAAGACACAGGCACAACTGGGTAGTGGCTCATTTGTGCTCTCACACTACACTGCTTCTGCTCCTGCTCCAGCTTAtcaatttaattgcattttagATGAACAGACTTCAACATATCAGAGGTCATATTGTTTCAGCAGATAAG
>TCONS_00025665
AGGATCTGGCAACCCTTGCCTGCTTTGTCGGGGTGGAGCTGAGCACGTTTGAACTGATTTTTTTCTGAGCTTTTTTGTTTCTCATGTAGTTTTTACAGGGACGAAGTCAATTAATTAAGTGTAAAAACCTTTCATCGAATGAAGGCAGATCCATTTTTAACCCTTTTCTGTGTTTCGGTTTCCCTGAGTGATATCGTCTGGTAACGTAAAAGGatgGGGGCAAATGAAGAGAAGAAGGAAAAATGTGGGACCATCTGCCTGAAATATCTCCTTTTCACATTCAATTTTCTGTTTTGGctTGCAGGAGTTGCAGTGATGGCTGTGGGCATCTGGACAGTAATTGAAAAGAGCGACTACATTAGTCTGCTGTCCTCAAAGATTTATGCTGTCTCTGCTTATATACTCATCATGGCAGGGGTGATTGTCATGATTACTGGAGTTTTAGGCTGCTGTGCCACCTTCAAGGAACAAAGACGCCTACTGAGAGTGtattttgtttTACTGCTGTGTATATTTCTGCTGGAGATCCTGGCTGGAGTTTTGGCCTACATTTATTACCAACAGCTAAATGACGAACTGAAAGAGAACCTGAGGGAGACAATGGTTCAGAAATACAATCAGTCTGAGCAGGAGCATGTAACTAAGGCTGTGGACAAGTTACAGCAGGAGTTCAAATGTTGTGGCAGTAACAGCTCATCTGATTGGGTGGACAGTGCTTGGATCCGCTCTAGTGAAGCTGATGGTCGATTGGTTCCTGACAGTTGCTGTAAGAGTCCAGTCAGAAAGTTCTGTGGTCGGAGAGACCACCCCtcaaatatatataaagtagAGGTGAGTCTCATAca
>TCONS_00025666
AGCTGAGCACGTTTGAACTGATTTTTTTCTGAGCTTTTTTGTTTCTCATGTAGTTTTTACAGGGACGAAGTCAATTAATTAAGTGTAAAAACCTTTCATCGAATGAAGGCAGATCCATTTTTAACCCTTTTCTGTGTTTCGGTTTCCCTGAGTGATATCGTCTGGTAACGTAAAAGGGCTACATATACGAAATAAAAGGACCTGAGAAGACCCAAATACAGTGGCGGAGTTAATACAAGatgGGGGCAAATGAAGAGAAGAAGGAAAAATGTGGGACCATCTGCCTGAAATATCTCCTTTTCACATTCAATTTTCTGTTTTGGctTGCAGGAGTTGCAGTGATGGCTGTGGGCATCTGGACAGTAATTGAAAAGAGCGACTACATTAGTCTGCTGTCCTCAAAGATTTATGCTGTCTCTGCTTATATACTCATCATGGCAGGGGTGATTGTCATGATTACTGGAGTTTTAGGCTGCTGTGCCACCTTCAAGGAACAAAGACGCCTACTGAGAGTGtattttgtttTACTGCTGTGTATATTTCTGCTGGAGATCCTGGCTG
>TCONS_00025667
aattgcattttagATGAACAGACTTCAACATATCAGAGGTCATATTGTTTCAGCAGATAAGCACATAAACATGTCTGCTACTCTGCCAAGTCCGCTTTCGACTCATGTGCTCAATATAGCCCAAGGAGTTCCTGGAGCCAATATGACCATTGTCCTCCATCGCCTTGACCCCGTCTCATCAGCCTGGAACATACTGACAACAGGGATTACTAATGATGATGGGCGGTGTCCTGGGTTAATCACAAAAGAAAACTTCATTGCTGGTGTGTATAAAATGAGATTTGAGACTGGAAAATACTGGGATGCTTTGGGCGAGACATGCTTCTATCCATATGTAGAGaTTGTCTTTACCATCACTAATACATCACAGCATTACCATGTTCCTCTACTTCTGAGTCGTTTCTCTTATAGTACATACAGGGGAAGCTAAAGGTAAAactgcttgtattttacagtgctgTACTTGTATGCTCCCACTGTAACCACTTTGTTATAATCTTCAGTTGTTAGTCATTTAAGTATTTTGTTGATGACTTGAACATTACATGTTAATGTAGAGGATCAATAAATTTTGAGTTGACACATCA
>TCONS_00025668
attgcattttagATGAACAGACTTCAACATATCAGAGGTCATATTGTTTCAGCAGATAAGCCCAAGGAGTTCCTGGAGCCAATATGACCATTGTCCTCCATCGCCTTGACCCCGTCTCATCAGCCTGGAACATACTGACAACAGGGATTACTAATGATGATGGGCGGTGTCCTGGGTTAATCACAAAAGAAAACTTCATTGCTGGTGTGTATAAAATGAGATTTGAGACTGGAAAATACTGGGATGCTTTGGGCGAGACATGCTTCTATCCATATGTAGAGaTTGTCTTTACCATCACTAATACATCACAGCATTACCATGTTCCTCTACTTCTGAGTCGTTTCTCTTATAGTACATACAGGGGAAGCTAAAGGTAAAactgcttgtattttacagtgctgTACTTGTATGCTCCCACTGTAACCACTTTGTTATAATCTTCAGTTGTTAGTCATTTAAGTATTTTGTTGATGACTTGAACATTACATGTTAATGTAGAGGATCAATAAATTTTGAGTTGACACATCA

Function

symbol description
cd151l Predicted to be involved in cell migration. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including epidermis; notochord; pharynx; pronephric duct; and ventricular zone. Orthologous to human CD151 (CD151 molecule (Raph blood group)).

GO:

id name namespace
GO:0016477 cell migration biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060825-253 Enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides and hydroxyisourate hydrolase activity. Acts upstream of or within purine nucleobase metabolic process. Predicted to be located in peroxisome.
ZDB-GENE-040426-1868 Predicted to be involved in cell migration. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including epidermis; notochord; pharynx; pronephric duct; and ventricular zone. Orthologous to human CD151 (CD151 molecule (Raph blood group)).

Ensembl:

ensembl_id ENSDARG00000068629 ENSDARG00000100719

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025664 False 3540 mRNA 0.36 8 30998472 31016439
TCONS_00025665 False 845 mRNA 0.43 6 30998590 31006528
TCONS_00025666 False 561 processed_transcript 0.41 5 30998626 31006058
TCONS_00025667 False 587 mRNA 0.39 4 31016379 31023447
TCONS_00025668 True 528 mRNA 0.39 4 31016380 31023447

Neighbor

gene id symbol gene type direction distance location
XLOC_012860 mthfsd coding upstream 46190 30878196 ~ 30952282 (+)
XLOC_012859 foxf1 coding upstream 148107 30847237 ~ 30850365 (+)
XLOC_012858 irf8 coding upstream 424623 30567945 ~ 30573849 (+)
XLOC_012857 dusp22a coding upstream 433784 30511230 ~ 30564688 (+)
XLOC_012856 cox4i1 coding upstream 488231 30507839 ~ 30510241 (+)
XLOC_012862 mvda coding downstream 33198 31056645 ~ 31068755 (+)
XLOC_012863 NA coding downstream 49796 31073243 ~ 31075619 (+)
XLOC_012864 tcf25 coding downstream 93689 31117136 ~ 31206658 (+)
XLOC_012865 NA coding downstream 257403 31280850 ~ 31459487 (+)
XLOC_012866 NA coding downstream 496131 31519578 ~ 31521691 (+)
XLOC_012854 NA non-coding upstream 866641 30129771 ~ 30131831 (+)
XLOC_012849 CT025546.2 non-coding upstream 1823264 29175093 ~ 29175208 (+)
XLOC_012845 CR769777.2 non-coding upstream 2694155 28303891 ~ 28304317 (+)
XLOC_012841 BX649600.1 non-coding upstream 3261632 27736724 ~ 27736840 (+)
XLOC_012835 BX640463.2 non-coding upstream 3802146 27196210 ~ 27196326 (+)
XLOC_012868 BX908763.1 non-coding downstream 822057 31845504 ~ 31846556 (+)
XLOC_012869 NA non-coding downstream 848574 31872021 ~ 31872676 (+)

Expression


Co-expression Network