G437702


Basic Information

Item Value
gene id G437702
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 226584 ~ 317938 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU502385
CACCAGTGCACAATGCAAGGTCCATAAAGACATGGATGAGCGAGTTTGGTGTGGAGGAACTTGACTGGCCTGCACAGAGTCCTGACCTCAACCCGATAGAACACCTTTGGGATGAATTAGAGCGGAGACTGTGAGCCAGGCCTTCTCGCCAACATCAGTGCCTGACCTCACAAATGCGCTTCTAGAAGAATGGTCAAAAATTCCCATAAACACACTCCTAAACCTTGTGGAAAGCCTTCCCAGAAAAGTTGAAGCTGTTATAGCTGCAAAGGGTGGGCCAACTCCATATTAAACCCTACGGATTAAGAATGGGATGTCATTAAAGTTCATGTGCACATAAAGGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502385 True 346 lncRNA 0.47 2 226584 317938

Neighbor

gene id symbol gene type direction distance location
CI01000308_00110535_00111604 NA coding downstream 114926 109601 ~ 111658 (-)
CI01000308_00041387_00048067 NA coding downstream 178331 41347 ~ 48253 (-)
CI01000308_00012346_00036304 CLCA5.2 coding downstream 190171 11975 ~ 36413 (-)
CI01000308_00003475_00004723 NA coding downstream 221757 3297 ~ 4827 (-)
CI01000308_00474123_00482394 NA coding upstream 156126 474064 ~ 483464 (-)
CI01000308_00529728_00530015 NA coding upstream 211680 529618 ~ 530145 (-)
CI01000308_00711286_00720426 NA coding upstream 393278 711216 ~ 720712 (-)
CI01000308_00750618_00755764 NA coding upstream 431849 749787 ~ 756480 (-)
CI01000308_01027964_01028971 GPR184 coding upstream 707907 1025845 ~ 1028971 (-)
G437640 NA non-coding downstream 83671 141598 ~ 142913 (-)
G437639 NA non-coding downstream 85127 141253 ~ 141457 (-)
G437633 NA non-coding downstream 94683 131584 ~ 131901 (-)
G437629 NA non-coding downstream 98663 127427 ~ 127921 (-)
G437627 NA non-coding downstream 101433 124019 ~ 125151 (-)
G438262 NA non-coding upstream 172952 490890 ~ 491161 (-)
G438286 NA non-coding upstream 232923 550861 ~ 551099 (-)
G438313 NA non-coding upstream 275051 592989 ~ 593241 (-)
G438317 NA non-coding upstream 300049 617987 ~ 618219 (-)
G438302 NA non-coding upstream 339145 657083 ~ 669785 (-)
G437635 NA other downstream 90899 135308 ~ 135685 (-)
G438434 NA other upstream 629618 947556 ~ 957849 (-)
G438671 NA other upstream 1459657 1777595 ~ 1782581 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003590 NA non-coding NC_007122.7 CM002895.2 35189723 ~ 35194538 (+)