G438302


Basic Information

Item Value
gene id G438302
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 657083 ~ 669785 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU503059
CATTAACAAGACGGAGTTTGGTGACACTTTGGAGCAACAAACACTATCAATGGCTTCGGATTGAGAACGGCCATTCAATAGAAAAGAAAAAGAAAATAATGTTTTATTAACGTGACCTTAATATGGATGGATGGATGGATGGATTTCACCTGGAAGTAACATACGGGATACCGCACGTCGAATTGTCCTATCAAACTAATGGTATGAAAGTACTGGAAAGCATCCTGGAGATGAAATGTTGCCAATGAAAAACAAACGCAATAGCGAAGATGCTGGACTCCCTGGACTGAACCAGCGAGGGGAGCATGATGTTGCAAAACTTCGCAGATGGGAAAGGCAGAGAGGAATGGGGAGGGGTGGAGGAGGAGAGGTGTGGAGGACAGCAAGAGGAGGGAGTAAAGGAGCCGGAGAGGTAGAGAGTAAGAGAGTCTCTGCATTTCAAGTGCTTAACAGTGACCTTAGAATCTCCCTCTATGTGTTTCGCTCTCAGTCTGTCTCTCTTTCGCACTCACTCTGCATTAAAGTACAAAGCTGCGTTTCTTCAGACCTTTAGTGTCCCAGGAACAACTACAAGAATGTCTGCAGGAGGATGCAGCCCTCCCTACCTCTGTTTCTCTCTTCCTCCCTCTTTTTCTACAACTTTATGATGCGTGGAAGATGAACAGTGACTCTGAGGCCTGAGTGCGGAGGAGAAGTTTGGACTTGTGGGCAGGACAAATTCCACTTTAAAATTTAAGAGCAAAGACTTCTCGTTTGATGGTTCATAACCGGGAATGGGTCATCTTCATGTGTTTTCCCCAGAGGAAAGAAAGCCAAATGGGTTTTGAACAGCATGAGGCTCCTGGTTCTTATGTCTACGAATACACTTCACCACTACCATGGACAGAATGAGCAAAGCAAGAATGCCCCCCACAGATGCCCCGATGGCGACAGCAATGGTCGAATCCCTTGGTGGTGGCACTGGGCAGAGGAAGGCAGAAAAAATGAGAGATTCTAACAACAAACTTCACCAAGTAGTAGCATATTTCTTCAATGAAAAAGTGTATTCAGAAAAATTTGTGTAAAATATGTAGTAAAAAAAAATGCTTTCTGGGACAAAATTGAGTAGTTACAGCTTCTACCTCCAGTGGCTAACTGGTCTATGCTAACCAGCCAAAATCTTAGTACTGGTTGCATTCTCAATGTTGCCATTAGGGGTGCTAGAGCAGACAGTAGTTATTAACATCTTCTATAGTTTTCTCTTTCAGATTGACTACTGTCTTAGTGGAGCAAGAGTTTAAATCTTTCTGAGCAAGTTAAGGTTGCTTCATTATGATGAACTTCAAATACACACCTTATTAATGTGTTTTCTCTTCAAATCAATAGAGTGCTGTAGAGATGACGTAAACACCTCTGATTGGCAATTGACCCTTCGCAAAGACCCGCCCCCCTTAGTTACTGTTGCTTTGTCCGACAAGCCATGGCACTGTCACGCCACACGCAATGTAAAATGCATTGCGGCGCAAAGAGGACACTGACAACACGTCGACAGTCAAGACAGAGCAGGTTACTTACGATATTAAACAAAGTCCCAGCTTTCAAATTGTGTAATTTTTTAAGAAATTCAAACAATAAAAACCGTTTTGTGGCTCTTTAATGTGTCGTGACAGATTGCTGTAGCTCTTCAGTTCAAGCAGCTCGTGAACCGATCATCTCTTTCTACTAGTTCATTTATAGCATCAAATAAACATGAATGAACATGAGAAGGAATGTTGTTTCAATCGTGGAAAGACGTCAATACACACCATTTTTCAAGTTCAAGTCCACCGAGGTTAATCTTCTAACTCCTGACTGCTTTGTTGGACAAAATGGCGGATTCGGCGTTATGATTGGTTAGATCGCTTGTCAATCAAACTCCCGGCAAAGGGTCAATTGTGTTCATACACTCATCGGATATGTCTGTGATTGGCTACAATGATCAACACTTCAAAAACATGTTGTAAATAGACATCAATGACGCTCTTCCCCGAGCGCTTACACAGATACACATGGGAGCGTTTGAAAGCAGGCGTCTATTAGCGGACCGTTCCTATGCGTTGATCATTGTAGCCAATCACAGACATTTCTGATGAGCACGTCAACACAAAGGCCAATCGGAGGCGTTTACAAATCCGCTTAACAGCGCTCAAAAAAGTATCACATTTTTAAAATTTCAGTACCGACGTGGTATCGCGGTTGACTTTTGACAACACTAAATGCAACCGTGGTGTAGTTTGTTTATATCCTACATTTAGCTTTATACTTCTACTGATTGTATTTAGGTTTCAAAATTCTTATAAGTTGTGTTCATTTGTGAAAATTATCATGATGTACATAACATGTAAGAATCATAAACTTTTGTTGGTCAAGGAGTTTATTTTCTACATCGATCCAAAAGCCAATGGAAAAATCCTATTGGGTTTTTGTCAAGGGAACCAGGGTGATGCAAACTTCTGGGCTGGCTTACAAAAATACATCATCACTGCAGTACTCTATTCTAATCCTGGACTTAACAACACCTGCAATAAGGACACCCTATTCATCATGACTTGTCCTGAAGTAACCCTGGTTGAAGACCCAAAACTTCTGTTGTACAGCTTCTTAGCCCATGCTGAAGTCTTACATTCAGTCAGGACGTTGAACTGGATGGTGCCGTGACCCGGAATGCGATCTGGAGGGTTGCGCACATAGCAATTGTAGATTCCATCGTCTGTCAACTGCACATCTGAAATAGTGATGCTGAGGTCGTTCTTCTCCAGGTTTCCAGAAAACATGACCCGATCTCCAAATCGGGTTGACTTCAGGGGTGTTATCCTGTTCTTATAAGTCATGAACTTGGAAAAGAAGAAATTTTGGATGAAGGTACATTGAGAAAAGTGATGAAACTAAAGAATTGTGTAACTTGTAAAGCATTGATATTACAATATTTTGATGATATTTAACATTTTAAGTCTCTTTATTTTTTTCTCACCATCTCCTCTGTGCTGTTGAGTGTCTCCTGATAGGTCCAGTTCATGGCAAACTTGCTGGGGTCCAGCTTGTAGCATGAGGTGAATGCACATGGGATTCTGACATTAGTGCCATTGAGAGCGTTGATCTGTTGTGGCACCAGCACATCCATGGAATTCACTGGACAGGCTACGAGATATGTAAATACACACATGTATAATTCCAGCCATGTGATTTTCCTGCCATCTAATTGGTACATGTTTTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU503059 True 3235 lncRNA 0.42 3 657083 669785

Neighbor

gene id symbol gene type direction distance location
CI01000308_00529728_00530015 NA coding downstream 126938 529618 ~ 530145 (-)
CI01000308_00474123_00482394 NA coding downstream 173619 474064 ~ 483464 (-)
CI01000308_00110535_00111604 NA coding downstream 545425 109601 ~ 111658 (-)
CI01000308_00041387_00048067 NA coding downstream 608830 41347 ~ 48253 (-)
CI01000308_00012346_00036304 CLCA5.2 coding downstream 620670 11975 ~ 36413 (-)
CI01000308_00711286_00720426 NA coding upstream 41431 711216 ~ 720712 (-)
CI01000308_00750618_00755764 NA coding upstream 80002 749787 ~ 756480 (-)
CI01000308_01027964_01028971 GPR184 coding upstream 356060 1025845 ~ 1028971 (-)
CI01000308_01060962_01079388 PRKD2 coding upstream 391094 1060879 ~ 1079388 (-)
CI01000308_01085455_01103053 NA coding upstream 415162 1084947 ~ 1104480 (-)
G438317 NA non-coding downstream 38864 617987 ~ 618219 (-)
G438313 NA non-coding downstream 63842 592989 ~ 593241 (-)
G438286 NA non-coding downstream 105984 550861 ~ 551099 (-)
G438262 NA non-coding downstream 165922 490890 ~ 491161 (-)
G437702 NA non-coding downstream 339145 226584 ~ 317938 (-)
G438336 NA non-coding upstream 64992 734777 ~ 735144 (-)
G438341 NA non-coding upstream 72241 742026 ~ 742248 (-)
G438343 NA non-coding upstream 77434 747219 ~ 747424 (-)
G438344 NA non-coding upstream 77737 747522 ~ 747737 (-)
G438355 NA non-coding upstream 99197 768982 ~ 786301 (-)
G437635 NA other downstream 521398 135308 ~ 135685 (-)
G438434 NA other upstream 277771 947556 ~ 957849 (-)
G438671 NA other upstream 1107810 1777595 ~ 1782581 (-)

Expression


Co-expression Network