G437854


Basic Information

Item Value
gene id G437854
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 1046446 ~ 1048498 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU502560
TGGAAACGGAGAAACAACAACTGACAAGCAGCAAAAACAGCAGTTTCTCGCTGTTGTTTTCACTCTTTTCAGAAACAGTTTAGTGTCTTCGAAAAACTCCGTTAGCATCCCGTTTTCAGAAGAGCAGCAACAAAATAACCCCTCTACAACAGAGGGGAAGCTCCGAAGATTTCAACATTTCTGAAGGAAGCTGCTGACAGAAGGAAACAGATACTTCCCTGCTGATGCCTTGCACCATAGCAGAGTTGGAGCGGATAAAAAAGTTCCTTTCGGACCACATGACTAGATGCCCAGCAAGGTTACTAGGATTACGGCAGCTCAAGTTTGGATCCAGCCTCACTTGTGAAGACTTCAGATGATGGAAACTATAGATGGACATACAAAACTAACAGATATTATCCTTATATTGTAATCATTGGTCCGGGTTCACAGACAGGGCTTAGATTAAGTCAGGATTAGGTCTTAGTTAAATTAGGACATTTAAGTAGCTTTTTTAAACATGCTTTAGAAAAAAATAAAAAAACATTACTGTTGTGCATCTTGACACAAAGCAATGACACTGACATATTTTAAGATATGCTTTAAGTTAAAGGGCTAGTTCACTCCAAAATTACATTTCTGTCATTAATTATTCACCCTCTTGTCGTTCCAAACCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502560 True 658 lncRNA 0.39 5 1046446 1048498

Neighbor

gene id symbol gene type direction distance location
CI01000308_01003736_01006059 NA coding upstream 39329 1003736 ~ 1007117 (+)
CI01000308_00983925_00991307 NA coding upstream 55057 983925 ~ 991389 (+)
CI01000308_00836074_00942387 DSCAML1 coding upstream 104059 836074 ~ 942387 (+)
CI01000308_00770560_00784179 NA coding upstream 260650 770272 ~ 785796 (+)
CI01000308_00695140_00699646 SCN4B, SCN4BA coding upstream 346545 695140 ~ 699901 (+)
CI01000308_01132580_01134190 FKRP coding downstream 83527 1132025 ~ 1134414 (+)
CI01000308_01594565_01626825 CADM2, CADM2B coding downstream 546067 1594565 ~ 1626825 (+)
CI01000308_01645574_01648364 CADM2 coding downstream 597035 1644246 ~ 1648567 (+)
CI01000308_01667660_01683460 MIPEP coding downstream 619162 1667660 ~ 1683598 (+)
CI01000308_01751621_01754826 NA coding downstream 703043 1751541 ~ 1755020 (+)
G437853 NA non-coding upstream 153211 878439 ~ 893235 (+)
G437941 NA non-coding upstream 214293 831892 ~ 832153 (+)
G437939 NA non-coding upstream 223296 822724 ~ 823150 (+)
G437938 NA non-coding upstream 223785 822389 ~ 822661 (+)
G437917 NA non-coding upstream 224843 785964 ~ 821603 (+)
G437952 NA non-coding downstream 6117 1054615 ~ 1058043 (+)
G437985 NA non-coding downstream 36838 1085336 ~ 1087243 (+)
G437837 NA non-coding downstream 62260 1110758 ~ 1114271 (+)
G437843 NA non-coding downstream 89088 1137586 ~ 1167949 (+)
G438099 NA non-coding downstream 363856 1412354 ~ 1412696 (+)

Expression


Co-expression Network