G437985


Basic Information

Item Value
gene id G437985
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 1085336 ~ 1087243 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU502698
TATTTTAAGCTCAAGAGAAGCTGGACATATTTTACAGTAGTTATTTTTTATATGGAATCTCTTGCAACCTCATCTACTGTACATCTCTGGGGTCATGTGGGCCCTGAGGTTGAACAGCTCTACATTAATAGCAGGTAAAAGAAAAGAAAAAAAGAAGACTGGGTAGCTAAACCAAGAGAGAACTGTGTGAGAGCATGAGAATCTGGGTCAAAAATAGCAACAGAGAAGTGAGAAACATGAACTATTAGAGTAGGGTTCCGCTTTTCATCATCACTGCCATTTCCTTTCATATATCTAGTGTTTACAATATACACACAGTTTATGTGGCTTTTTATGCCCAGCGCTGCTTCTTTACTTGAAAAGAAGAGTTCACACAGTCCTAAGCACTGAAGACAAGTGTCAAATGTGTCTTTTTGTGTATCAAGCTCTCGGATGCACTACAGTCAATAAAGCGAGACCTTCTCTTTTGATAGTTCGTTTTGAATTGATCTAGAGGACAGATAACTGTAATTGAAACTGCTGCCTAAAATGCCACAAGCAGATCAAATGAAATATTACAACTATTTGCAATACTATCTTTCAGTCTATCAATGAACAAAAACAAAGCTTCACAAACATAAGGCCTAAATAGCTCTAAAGATTTACGTTGTTGCACAGACGTCATTGATTATAAGGTCATACCAGACTCATACTCAGTGAATCGTGCCAGAAGCTGTAATTGCTTATATGACCTATTCAGATGGCAATATAATAGCTAAAGCCACTATTTGCACAGTAATTACTACAGTCGACCAATATAAAGCAAATAAACAATGCATATGACATCACATTTACTGAGCCAGAATTTGTGACATTCTACCTGAAAGTTTCTGTAACATATTGCCTACGGTTGATAGGTGACATTTAGGGCTCTGTCTACAAGTGCACCTGAAACTCATACCTCTGAGTCGGGCACTCATTATTAGCACAGGTCACGCATATTAGTTGGAAACATAACACAGAAGTAGCTTTTAAAAAAATGATATTGAGGACAATAAGCCCACATTGTGAATGTGGACTACATCTGAATTCAAAATGATATTTATATATGGCATCAAAACCAAATGTTTGTGTTACATAAAGAAAATGTGAAAATGAGAATTAATAAGAATTGACCCTTTGGTGATTTTGAATGAACGTAGGCTGCCCCCGAAATCGCATACTTCCCTACTATATAGTAGGTGAAAAACAGTATGTGATAAAAGAAGTATGTCTGAATTCACAAAAGTAGGCAAAATGTATCTGGATGTCCTACTACTTCCTGCACTCAAAATAATGATACTTTAAACCAGGGGTGGGCAAACTCGAGTCAATTATGGACAGTGGTTCCACACAACCAACTTAGTTTTTATCAACATTAAAGGTTTATTTTTAATCTATGCCATATCCTTGTGTTGTGACAACACAACTGACTAAGGAAGAATCTATGTAAATAGTTATGTCCAACCAACTCAATTCAATCATGGACAGTGGTTCCACATGTTCGAAACAAGTAAAACCCAATAGAATCAACCATGTTAAACAAACTAGAATCAATTGTGTTCATTTAACTTGAAAGAATGGTTTTAGTTTTCATATTAATTGAATTATCCAAATAATCCTACAATTAATGCTTCTTAGTTAGTCTTGTGAGTTACATAACTTTTGTGATATGATGTTCTGTGTTGGCAGTCTAGAAGTGATACTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502698 True 1728 lncRNA 0.36 2 1085336 1087243

Neighbor

gene id symbol gene type direction distance location
CI01000308_01003736_01006059 NA coding upstream 78219 1003736 ~ 1007117 (+)
CI01000308_00983925_00991307 NA coding upstream 93947 983925 ~ 991389 (+)
CI01000308_00836074_00942387 DSCAML1 coding upstream 142949 836074 ~ 942387 (+)
CI01000308_00770560_00784179 NA coding upstream 299540 770272 ~ 785796 (+)
CI01000308_00695140_00699646 SCN4B, SCN4BA coding upstream 385435 695140 ~ 699901 (+)
CI01000308_01132580_01134190 FKRP coding downstream 44782 1132025 ~ 1134414 (+)
CI01000308_01594565_01626825 CADM2, CADM2B coding downstream 507322 1594565 ~ 1626825 (+)
CI01000308_01645574_01648364 CADM2 coding downstream 558290 1644246 ~ 1648567 (+)
CI01000308_01667660_01683460 MIPEP coding downstream 580417 1667660 ~ 1683598 (+)
CI01000308_01751621_01754826 NA coding downstream 664298 1751541 ~ 1755020 (+)
G437952 NA non-coding upstream 27293 1054615 ~ 1058043 (+)
G437854 NA non-coding upstream 36838 1046446 ~ 1048498 (+)
G437853 NA non-coding upstream 192101 878439 ~ 893235 (+)
G437941 NA non-coding upstream 253183 831892 ~ 832153 (+)
G437939 NA non-coding upstream 262186 822724 ~ 823150 (+)
G437837 NA non-coding downstream 23515 1110758 ~ 1114271 (+)
G437843 NA non-coding downstream 50343 1137586 ~ 1167949 (+)
G438099 NA non-coding downstream 325111 1412354 ~ 1412696 (+)
G438100 NA non-coding downstream 325508 1412751 ~ 1413110 (+)
G438032 NA non-coding downstream 333777 1421020 ~ 1533788 (+)

Expression


Co-expression Network