G437837


Basic Information

Item Value
gene id G437837
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 1110758 ~ 1114271 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU502534
TCGGGAGGCTTCAGATGGCTTGTTGTTTTGTTCGCTGATGTCACACACTGCATGTTCGTGTAAATTTACTTACTGCCGGAGATGAGGTAAGTGCCTTTAGGGTCTGTGGTAAGACAGGTTACAGCATCCAGGTGAGCCACCATGGAATGGATCACTTTCCCTGTCTTGTTGTCCAGGTAGCGGATGGTACGATTCTCGTGGGCTGTAATGGAAATCGGTTGGGAAGGATGGCTGACCACGCGGTTAATAAGCTCGCTGCCATCCTTAGTCTGGGTCTCCAGGACCATGATGCTTTGCTCTGTGTTGAGGTCATAAAGCAGAGTCTCGCCCCCATCGAAAGACACAACAACCTGGGATGGGTCAGTGTTTACAAAGGCAACCGAGGTGGGAGTGCCGTGTTCTTTCTCCTTGTTGAAAACAGACACACACGGTGAGGAATTATGGGGGTCCCAAATCCGCACGGTCCCATCTGCTGAGCAGGAGGCCAAACGCTTCAGGCTGGAGGAGTAAGCCAATCCCCACACTGCGTCTTCATGCCCTGACAACACGCTGCTCTCCACACCTGGATCATAGTTGTCGTAAGGATCCACATTAAGGTCTGGAATCTTCCAGCCTCGCACGGTGCCATCCAGACCGCCGCTGTAGCATGATTCT
>TU502533
TTTTGGGTGAACTATCCCTTTAAGACAATTTCCATTGCTGACACGTATCCACAAAAAATCAATAAAAGCGTCCTAATGTGCCTGAAAATAAAGCCACAGGTACCGCACCACTGGGTTCACGTTCCAGATGTCTTTTCTTCACGGGCTAATCTTTCACACCAAGAATGTTATTCACTTCTCTTCAAGTGCTCTTGCTATATAAACTGCTGTTTAAAGGTTGGTGTCTGGCATCGATACGATTGAGGATTTTTTATAACGAAGGTTATTTTTTAACTGCTTTGTGAGGTCTATTGTGACTGCACTATAGGAGAGTCAAATAGCTTTGCTGGTGTATTTACAGTTCCCACAGTGCACAGCTGGAAAATATGCAGTGAGTGTTATTATGGGCATCAACATTGCTACAAGCTCTCGACATACACACACACACACACACACACACACACACACACACACACACCTGTCTTGTTGTCCAGGTAGCGGATGGTACGATTCTCGTGGGCTGTAATGGAAATCGGTTGGGAAGGATGGCTGACCACGCGGTTAATAAGCTCGCTGCCATCCTTAGTCTGGGTCTCCAGGACCATGATGCTTTGCTCTGTGTTGAGGTCATAAAGCAGAGTCTCGCCCCCATCGAAAGACACAACAACCTGGGATGGGTCAGTGTTTACAAAGGCAACCGAGGTGGGAGTGCCGTGTTCTTTCTCCTTGTTGAAAACAGACACACACGGTGAGGAATTATGGGGGTCCCAAATCCGCACGGTCCCATCTGCTGAGCAGGAGGCCAAACGCTTCAGGCTGGAGGAGTAAGCCAATCCCCACACTGCGTCTTCATGCCCTGACAACACGCTGCTCTCCACACCTGGATCATAGTTGTCGTAAGGATCCACATTAAGGTCTGGAATCTTCCAGCCTCGCACGGTGCCATCCAGACCGCCGCTGTAGCATGATTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502534 False 654 lncRNA 0.52 5 1110758 1114271
TU502533 True 951 lncRNA 0.48 4 1111369 1114271

Neighbor

gene id symbol gene type direction distance location
CI01000308_01003736_01006059 NA coding upstream 103641 1003736 ~ 1007117 (+)
CI01000308_00983925_00991307 NA coding upstream 119369 983925 ~ 991389 (+)
CI01000308_00836074_00942387 DSCAML1 coding upstream 168371 836074 ~ 942387 (+)
CI01000308_00770560_00784179 NA coding upstream 324962 770272 ~ 785796 (+)
CI01000308_00695140_00699646 SCN4B, SCN4BA coding upstream 410857 695140 ~ 699901 (+)
CI01000308_01132580_01134190 FKRP coding downstream 17754 1132025 ~ 1134414 (+)
CI01000308_01594565_01626825 CADM2, CADM2B coding downstream 480294 1594565 ~ 1626825 (+)
CI01000308_01645574_01648364 CADM2 coding downstream 531262 1644246 ~ 1648567 (+)
CI01000308_01667660_01683460 MIPEP coding downstream 553389 1667660 ~ 1683598 (+)
CI01000308_01751621_01754826 NA coding downstream 637270 1751541 ~ 1755020 (+)
G437985 NA non-coding upstream 23515 1085336 ~ 1087243 (+)
G437952 NA non-coding upstream 52715 1054615 ~ 1058043 (+)
G437854 NA non-coding upstream 62260 1046446 ~ 1048498 (+)
G437853 NA non-coding upstream 217523 878439 ~ 893235 (+)
G437941 NA non-coding upstream 278605 831892 ~ 832153 (+)
G437843 NA non-coding downstream 23315 1137586 ~ 1167949 (+)
G438099 NA non-coding downstream 298083 1412354 ~ 1412696 (+)
G438100 NA non-coding downstream 298480 1412751 ~ 1413110 (+)
G438032 NA non-coding downstream 306749 1421020 ~ 1533788 (+)
G438033 NA non-coding downstream 329102 1443373 ~ 1463430 (+)

Expression


Co-expression Network